Well, not yet. openblas has compiled successfully. The problem now is with R. The R log follows.
Apparently it needs libgomp-4 and if I understood correctrly, it found an older version. But the libgomp-4 is installed [defrancaferr_joa@javel sage-7.5.1]$ rpm -q libgomp libgomp-4.4.7-17.el6.x86_64 On Wednesday, February 1, 2017 at 5:56:44 PM UTC+1, João Alberto Ferreira wrote: > > Thank you! > > I've done: > > [defrancaferr_joa@javel ~]$ sudo yum install centos-release-scl > [defrancaferr_joa@javel ~]$ sudo yum install devtoolset-3-toolchain > [defrancaferr_joa@javel ~]$ scl enable devtoolset-3 bash > [defrancaferr_joa@javel ~]$ as --version > Assembleur GNU version 2.24 > Copyright 2013 Free Software Foundation, Inc. > Ce logiciel est libre; vous pouvez le redistribuer selon les termes de la > version 3 de la licence GNU General Public License ou suivante. > Ce programme n'est couvert par AUCUNE garantie. > Cet assembleur a été configuré pour la cible « x86_64-redhat-linux ». > > Let's see if it will work. > > > > On Wednesday, February 1, 2017 at 5:27:36 PM UTC+1, Dima Pasechnik wrote: >> >> >> >> On Wednesday, February 1, 2017 at 3:52:05 PM UTC, João Alberto Ferreira >> wrote: >>> >>> Hi! >>> >>> Here it is the command output. >>> >>> [defrancaferr_joa@javel ~]$ as --version >>> GNU assembler version 2.20.51.0.2-5.44.el6 20100205 >>> Copyright 2009 Free Software Foundation, Inc. >>> >> >> Thanks, this explains your problem. Your assembler is 7 years old, and >> your CPU >> is only 4 years old, if not newer. You are building with (sage-supplied) >> gcc 4.9, which issues correct assembler commands for your CPU. >> But your assembler does not understand some of them, as it is too old. >> >> Why Centos is so lame in this respect, we've seen many reports like >> this... >> You should upgrade your toolchain so that your assembler fully supports >> you CPU. >> >> HTH, >> Dima >> >> >> >>> This program is free software; you may redistribute it under the terms of >>> the GNU General Public License version 3 or later. >>> This program has absolutely no warranty. >>> This assembler was configured for a target of `x86_64-redhat-linux'. >>> >>> On Wednesday, February 1, 2017 at 12:05:22 PM UTC+1, Dima Pasechnik >>> wrote: >>>> >>>> please post the output of >>>> >>>> as --version >>>> >>>> on the system. I guess it is too old to understand the whole range of >>>> assembler commands for your CPU. >>>> >>>> >>>> On Wednesday, February 1, 2017 at 10:09:27 AM UTC, João Alberto >>>> Ferreira wrote: >>>>> >>>>> Hi! >>>>> >>>>> I have tried to compile sagemath under a CentOS 6.8 machine, as the >>>>> binaries for Fedora do not work. The installation halted with an error >>>>> while building OpenBlas. Made the error is due to the machine CPU, as >>>>> discussed in https://github.com/JuliaLang/julia/issues/7653, but I >>>>> have little experience in this. Part of the installation log is attached. >>>>> I >>>>> updated the operating system and want to try build Sage again. Does >>>>> anyone >>>>> have any sugestion? >>>>> >>>>> It seems that all developing tools are installed, as can be seen below >>>>> >>>>> [defrancaferr_joa@javel ~]$ rpm -q perl-ExtUtils-MakeMaker >>>>> perl-ExtUtils-MakeMaker-6.55-141.el6_7.1.x86_64 >>>>> [defrancaferr_joa@javel ~]$ which perl >>>>> /usr/bin/perl >>>>> [defrancaferr_joa@javel ~]$ rpm -q binutils >>>>> binutils-2.20.51.0.2-5.44.el6.x86_64 >>>>> [defrancaferr_joa@javel ~]$ rpm -q gcc >>>>> gcc-4.4.7-17.el6.x86_64 >>>>> [defrancaferr_joa@javel ~]$ rpm -q make >>>>> make-3.81-23.el6.x86_64 >>>>> [defrancaferr_joa@javel ~]$ rpm -q m4 >>>>> m4-1.4.13-5.el6.x86_64 >>>>> [defrancaferr_joa@javel ~]$ rpm -q perl >>>>> perl-5.10.1-141.el6_7.1.x86_64 >>>>> [defrancaferr_joa@javel ~]$ rpm -q tar >>>>> tar-1.23-15.el6_8.x86_64 >>>>> [defrancaferr_joa@javel ~]$ rpm -q git >>>>> git-1.7.1-4.el6_7.1.x86_64 >>>>> [defrancaferr_joa@javel ~]$ rpm -q gcc-c++ >>>>> gcc-c++-4.4.7-17.el6.x86_64 >>>>> [defrancaferr_joa@javel ~]$ rpm -q gcc-gfortran >>>>> gcc-gfortran-4.4.7-17.el6.x86_64 >>>>> [defrancaferr_joa@javel ~]$ rpm -q python >>>>> python-2.6.6-66.el6_8.x86_64 >>>>> [defrancaferr_joa@javel ~]$ lscpu >>>>> Architecture: x86_64 >>>>> CPU op-mode(s): 32-bit, 64-bit >>>>> Byte Order: Little Endian >>>>> CPU(s): 32 >>>>> On-line CPU(s) list: 0-31 >>>>> Thread(s) par coeur : 2 >>>>> Coeur(s) par support CPU :8 >>>>> Socket(s): 2 >>>>> Noeud(s) NUMA : 2 >>>>> ID du vendeur : GenuineIntel >>>>> Famille CPU : 6 >>>>> Modèle : 79 >>>>> Model name: Intel(R) Xeon(R) CPU E5-2620 v4 @ 2.10GHz >>>>> Version : 1 >>>>> CPU MHz : 1200.000 >>>>> BogoMIPS: 4190.00 >>>>> Virtualisation : VT-x >>>>> L1d cache : 32K >>>>> L1i cache : 32K >>>>> L2 cache : 256K >>>>> L3 cache : 20480K >>>>> NUMA node0 CPU(s): 0-7,16-23 >>>>> NUMA node1 CPU(s): 8-15,24-31 >>>>> >>>> -- You received this message because you are subscribed to the Google Groups "sage-support" group. 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Found local metadata for r-3.2.4-revised.p0 Using cached file /home/defrancaferr_joa/sage-7.5.1/upstream/R-3.2.4-revised.tar.gz r-3.2.4-revised.p0 ==================================================== Setting up build directory for r-3.2.4-revised.p0 Finished extraction Applying patches from ../patches... Applying ../patches/R.sh.patch patching file src/scripts/R.sh.in Applying ../patches/configure.patch patching file configure Hunk #1 succeeded at 22924 (offset 47 lines). Hunk #2 succeeded at 23280 (offset 47 lines). Applying ../patches/dont_lose_libz_libbz2_in_configure.patch patching file m4/R.m4 Hunk #1 succeeded at 3111 (offset 4 lines). patching file configure Hunk #1 succeeded at 34595 (offset 52 lines). Applying ../patches/large_address_aware.patch patching file configure.ac Hunk #1 succeeded at 1340 (offset 30 lines). patching file configure Hunk #1 succeeded at 26365 (offset 52 lines). Applying ../patches/parent_sig_handler.patch patching file src/library/parallel/src/fork.c Hunk #1 succeeded at 229 with fuzz 1 (offset 2 lines). Applying ../patches/rcmd_exec.patch patching file src/scripts/Rcmd.in Applying ../patches/scripts.Makefile.in.patch patching file src/scripts/Makefile.in **************************************************** Host system: Linux javel.supelec.fr 2.6.32-642.13.1.el6.x86_64 #1 SMP Wed Jan 11 20:56:24 UTC 2017 x86_64 x86_64 x86_64 GNU/Linux **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/opt/rh/devtoolset-3/root/usr/libexec/gcc/x86_64-redhat-linux/4.9.2/lto-wrapper Target: x86_64-redhat-linux Configured with: ../configure --prefix=/opt/rh/devtoolset-3/root/usr --mandir=/opt/rh/devtoolset-3/root/usr/share/man --infodir=/opt/rh/devtoolset-3/root/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --enable-languages=c,c++,fortran,lto --enable-plugin --with-linker-hash-style=gnu --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.9.2-20150212/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.9.2-20150212/obj-x86_64-redhat-linux/cloog-install --with-mpc=/builddir/build/BUILD/gcc-4.9.2-20150212/obj-x86_64-redhat-linux/mpc-install --with-tune=generic 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(cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc Finished configuring src/extra/intl directory using as R_SHELL for scripts ... /bin/sh configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating 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config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/f77_f2c config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing stamp-h commands R is now configured for x86_64-pc-linux-gnu Source directory: . Installation directory: /home/defrancaferr_joa/sage-7.5.1/local C compiler: gcc -std=gnu99 -g -O2 Fortran 77 compiler: gfortran -g -O2 C++ compiler: g++ -g -O2 C++ 11 compiler: g++ -std=c++11 -g -O2 Fortran 90/95 compiler: gfortran -g -O2 Obj-C compiler: Interfaces supported: X11 External libraries: readline, BLAS(OpenBLAS), LAPACK(generic), zlib, bzlib Additional capabilities: PNG, JPEG, NLS, cairo Options enabled: shared R library, R profiling Capabilities skipped: TIFF, ICU Options not enabled: shared BLAS, memory profiling Recommended packages: yes configure: WARNING: you cannot build info or HTML versions of the R manuals make[3]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src' make[4]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/m4' make[4]: Nothing to be done for `R'. make[4]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/m4' make[4]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/tools' make[4]: Nothing to be done for `R'. make[4]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/tools' make[4]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/doc' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/doc/html' make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/doc/html' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/doc/manual' make[5]: Nothing to be done for `R'. make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/doc/manual' make[4]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/doc' make[4]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/etc' make[4]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/etc' make[4]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/share' make[4]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/share' make[4]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/scripts' creating src/scripts/R.fe make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/scripts' mkdir -p -- ../../bin make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/scripts' make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/scripts' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/include' mkdir -p -- ../../include make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/include/R_ext' make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/include' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra' make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/xz' make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/pcre' make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/tre' make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/tre' make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/pcre' making regcomp.d from regcomp.c making regerror.d from regerror.c making regexec.d from regexec.c making tre-ast.d from tre-ast.c making tre-compile.d from tre-compile.c touch stamp making pcre_chartables.d from pcre_chartables.c making tre-match-approx.d from tre-match-approx.c make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/xz' gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c alone_decoder.c -o alone_decoder.o making pcre_compile.d from pcre_compile.c making pcre_config.d from pcre_config.c making pcre_exec.d from pcre_exec.c making pcre_get.d from pcre_get.c making pcre_fullinfo.d from pcre_fullinfo.c making tre-match-backtrack.d from tre-match-backtrack.c gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c alone_encoder.c -o alone_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c arm.c -o arm.o making tre-match-parallel.d from tre-match-parallel.c gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c armthumb.c -o armthumb.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c auto_decoder.c -o auto_decoder.o making tre-mem.d from tre-mem.c making pcre_globals.d from pcre_globals.c gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c block_buffer_decoder.c -o block_buffer_decoder.o making tre-parse.d from tre-parse.c making pcre_jit_compile.d from pcre_jit_compile.c making tre-stack.d from tre-stack.c making xmalloc.d from xmalloc.c making pcre_maketables.d from pcre_maketables.c making pcre_newline.d from pcre_newline.c making pcre_ord2utf8.d from pcre_ord2utf8.c gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c block_buffer_encoder.c -o block_buffer_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c block_decoder.c -o block_decoder.o making pcre_refcount.d from pcre_refcount.c making pcre_study.d from pcre_study.c make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/tre' make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/tre' gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c regcomp.c -o regcomp.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c block_encoder.c -o block_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c block_header_decoder.c -o block_header_decoder.o gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c regerror.c -o regerror.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c block_header_encoder.c -o block_header_encoder.o making pcre_tables.d from pcre_tables.c making pcre_ucd.d from pcre_ucd.c gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c block_util.c -o block_util.o making pcre_valid_utf8.d from pcre_valid_utf8.c gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c regexec.c -o regexec.o making pcre_version.d from pcre_version.c gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c check.c -o check.o gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-ast.c -o tre-ast.o making pcre_xclass.d from pcre_xclass.c gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-compile.c -o tre-compile.o gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c common.c -o common.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c crc32_fast.c -o crc32_fast.o make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/pcre' make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/pcre' gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_chartables.c -o pcre_chartables.o gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c crc32_table.c -o crc32_table.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_compile.c -o pcre_compile.o gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-mem.c -o tre-mem.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c crc64_fast.c -o crc64_fast.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_config.c -o pcre_config.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c crc64_table.c -o crc64_table.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c delta_common.c -o delta_common.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_exec.c -o pcre_exec.o gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-parse.c -o tre-parse.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c delta_decoder.c -o delta_decoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c delta_encoder.c -o delta_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c easy_buffer_encoder.c -o easy_buffer_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c easy_decoder_memusage.c -o easy_decoder_memusage.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_fullinfo.c -o pcre_fullinfo.o gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c tre-stack.c -o tre-stack.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c easy_encoder.c -o easy_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c easy_encoder_memusage.c -o easy_encoder_memusage.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_get.c -o pcre_get.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c easy_preset.c -o easy_preset.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c fastpos_table.c -o fastpos_table.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c filter_buffer_decoder.c -o filter_buffer_decoder.o gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c xmalloc.c -o xmalloc.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_globals.c -o pcre_globals.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c filter_buffer_encoder.c -o filter_buffer_encoder.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_jit_compile.c -o pcre_jit_compile.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c filter_common.c -o filter_common.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_maketables.c -o pcre_maketables.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_newline.c -o pcre_newline.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_ord2utf8.c -o pcre_ord2utf8.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c filter_decoder.c -o filter_decoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c filter_encoder.c -o filter_encoder.o ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o ranlib libtre.a gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c filter_flags_decoder.c -o filter_flags_decoder.o make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/tre' make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/tre' gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_refcount.c -o pcre_refcount.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c filter_flags_encoder.c -o filter_flags_encoder.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_study.c -o pcre_study.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c ia64.c -o ia64.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c index.c -o index.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_tables.c -o pcre_tables.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_ucd.c -o pcre_ucd.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_valid_utf8.c -o pcre_valid_utf8.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c index_decoder.c -o index_decoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c index_encoder.c -o index_encoder.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_version.c -o pcre_version.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c index_hash.c -o index_hash.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c lz_decoder.c -o lz_decoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c lz_encoder.c -o lz_encoder.o gcc -std=gnu99 -I. -DLINK_SIZE=2 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c pcre_xclass.c -o pcre_xclass.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c lz_encoder_mf.c -o lz_encoder_mf.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c lzma2_decoder.c -o lzma2_decoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c lzma2_encoder.c -o lzma2_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c lzma_decoder.c -o lzma_decoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c lzma_encoder.c -o lzma_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c lzma_encoder_optimum_fast.c -o lzma_encoder_optimum_fast.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c lzma_encoder_optimum_normal.c -o lzma_encoder_optimum_normal.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c lzma_encoder_presets.c -o lzma_encoder_presets.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c powerpc.c -o powerpc.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c price_table.c -o price_table.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c sha256.c -o sha256.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c simple_coder.c -o simple_coder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c simple_decoder.c -o simple_decoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c simple_encoder.c -o simple_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c sparc.c -o sparc.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c stream_buffer_decoder.c -o stream_buffer_decoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c stream_buffer_encoder.c -o stream_buffer_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c stream_decoder.c -o stream_decoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c stream_encoder.c -o stream_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c stream_flags_common.c -o stream_flags_common.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c stream_flags_decoder.c -o stream_flags_decoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c stream_flags_encoder.c -o stream_flags_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c vli_decoder.c -o vli_decoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c vli_encoder.c -o vli_encoder.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c vli_size.c -o vli_size.o gcc -std=gnu99 -I./api -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c x86.c -o x86.o ar -cr liblzma.a alone_decoder.o alone_encoder.o arm.o armthumb.o auto_decoder.o block_buffer_decoder.o block_buffer_encoder.o block_decoder.o block_encoder.o block_header_decoder.o block_header_encoder.o block_util.o check.o common.o crc32_fast.o crc32_table.o crc64_fast.o crc64_table.o delta_common.o delta_decoder.o delta_encoder.o easy_buffer_encoder.o easy_decoder_memusage.o easy_encoder.o easy_encoder_memusage.o easy_preset.o fastpos_table.o filter_buffer_decoder.o filter_buffer_encoder.o filter_common.o filter_decoder.o filter_encoder.o filter_flags_decoder.o filter_flags_encoder.o ia64.o index.o index_decoder.o index_encoder.o index_hash.o lz_decoder.o lz_encoder.o lz_encoder_mf.o lzma2_decoder.o lzma2_encoder.o lzma_decoder.o lzma_encoder.o lzma_encoder_optimum_fast.o lzma_encoder_optimum_normal.o lzma_encoder_presets.o powerpc.o price_table.o sha256.o simple_coder.o simple_decoder.o simple_encoder.o sparc.o stream_buffer_decoder.o stream_buffer_encoder.o stream_decoder.o stream_encoder.o stream_flags_common.o stream_flags_decoder.o stream_flags_encoder.o vli_decoder.o vli_encoder.o vli_size.o x86.o ranlib liblzma.a make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/xz' make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/xz' ar -cr libpcre.a pcre_chartables.o pcre_compile.o pcre_config.o pcre_exec.o pcre_fullinfo.o pcre_get.o pcre_globals.o pcre_jit_compile.o pcre_maketables.o pcre_newline.o pcre_ord2utf8.o pcre_refcount.o pcre_study.o pcre_tables.o pcre_ucd.o pcre_valid_utf8.o pcre_version.o pcre_xclass.o ranlib libpcre.a make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/pcre' make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra/pcre' make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/extra' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/appl' making integrate.d from integrate.c making interv.d from interv.c making maxcol.d from maxcol.c making optim.d from optim.c making pretty.d from pretty.c making uncmin.d from uncmin.c make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/appl' gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c integrate.c -o integrate.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c interv.c -o interv.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c maxcol.c -o maxcol.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c optim.c -o optim.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pretty.c -o pretty.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c uncmin.c -o uncmin.o gfortran -fopenmp -fpic -g -O2 -c dchdc.f -o dchdc.o gfortran -fopenmp -fpic -g -O2 -c dpbfa.f -o dpbfa.o gfortran -fopenmp -fpic -g -O2 -c dpbsl.f -o dpbsl.o gfortran -fopenmp -fpic -g -O2 -c dpoco.f -o dpoco.o gfortran -fopenmp -fpic -g -O2 -c dpodi.f -o dpodi.o gfortran -fopenmp -fpic -g -O2 -c dpofa.f -o dpofa.o gfortran -fopenmp -fpic -g -O2 -c dposl.f -o dposl.o gfortran -fopenmp -fpic -g -O2 -c dqrdc.f -o dqrdc.o gfortran -fopenmp -fpic -g -O2 -c dqrdc2.f -o dqrdc2.o gfortran -fopenmp -fpic -g -O2 -c dqrls.f -o dqrls.o gfortran -fopenmp -fpic -g -O2 -c dqrsl.f -o dqrsl.o gfortran -fopenmp -fpic -g -O2 -c dqrutl.f -o dqrutl.o gfortran -fopenmp -fpic -g -O2 -c dsvdc.f -o dsvdc.o gfortran -fopenmp -fpic -g -O2 -c dtrco.f -o dtrco.o gfortran -fopenmp -fpic -g -O2 -c dtrsl.f -o dtrsl.o ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o ranlib libappl.a make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/appl' make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/appl' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/nmath' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making expm1.d from expm1.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/nmath' gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c mlutils.c -o mlutils.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c d1mach.c -o d1mach.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c i1mach.c -o i1mach.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c fmax2.c -o fmax2.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c fmin2.c -o fmin2.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c fprec.c -o fprec.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c fround.c -o fround.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c ftrunc.c -o ftrunc.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c sign.c -o sign.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c fsign.c -o fsign.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c imax2.c -o imax2.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c imin2.c -o imin2.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c chebyshev.c -o chebyshev.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c log1p.c -o log1p.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c expm1.c -o expm1.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c lgammacor.c -o lgammacor.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c gammalims.c -o gammalims.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c stirlerr.c -o stirlerr.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c bd0.c -o bd0.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c gamma.c -o gamma.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c lgamma.c -o lgamma.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c gamma_cody.c -o gamma_cody.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c beta.c -o beta.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c lbeta.c -o lbeta.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c polygamma.c -o polygamma.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c cospi.c -o cospi.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c bessel_i.c -o bessel_i.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c bessel_j.c -o bessel_j.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c bessel_k.c -o bessel_k.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c bessel_y.c -o bessel_y.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c choose.c -o choose.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c snorm.c -o snorm.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c sexp.c -o sexp.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dgamma.c -o dgamma.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pgamma.c -o pgamma.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qgamma.c -o qgamma.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rgamma.c -o rgamma.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dbeta.c -o dbeta.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pbeta.c -o pbeta.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qbeta.c -o qbeta.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rbeta.c -o rbeta.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dunif.c -o dunif.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c punif.c -o punif.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qunif.c -o qunif.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c runif.c -o runif.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dnorm.c -o dnorm.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pnorm.c -o pnorm.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qnorm.c -o qnorm.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rnorm.c -o rnorm.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dlnorm.c -o dlnorm.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c plnorm.c -o plnorm.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qlnorm.c -o qlnorm.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rlnorm.c -o rlnorm.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c df.c -o df.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pf.c -o pf.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qf.c -o qf.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rf.c -o rf.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dnf.c -o dnf.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dt.c -o dt.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pt.c -o pt.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qt.c -o qt.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rt.c -o rt.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dnt.c -o dnt.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dchisq.c -o dchisq.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pchisq.c -o pchisq.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qchisq.c -o qchisq.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rchisq.c -o rchisq.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rnchisq.c -o rnchisq.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dbinom.c -o dbinom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pbinom.c -o pbinom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qbinom.c -o qbinom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rbinom.c -o rbinom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rmultinom.c -o rmultinom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dcauchy.c -o dcauchy.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pcauchy.c -o pcauchy.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qcauchy.c -o qcauchy.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rcauchy.c -o rcauchy.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dexp.c -o dexp.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pexp.c -o pexp.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qexp.c -o qexp.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rexp.c -o rexp.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dgeom.c -o dgeom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pgeom.c -o pgeom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qgeom.c -o qgeom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rgeom.c -o rgeom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dhyper.c -o dhyper.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c phyper.c -o phyper.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qhyper.c -o qhyper.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rhyper.c -o rhyper.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dnbinom.c -o dnbinom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pnbinom.c -o pnbinom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qnbinom.c -o qnbinom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rnbinom.c -o rnbinom.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dpois.c -o dpois.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c ppois.c -o ppois.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qpois.c -o qpois.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rpois.c -o rpois.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dweibull.c -o dweibull.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pweibull.c -o pweibull.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qweibull.c -o qweibull.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rweibull.c -o rweibull.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dlogis.c -o dlogis.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c plogis.c -o plogis.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qlogis.c -o qlogis.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rlogis.c -o rlogis.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dnchisq.c -o dnchisq.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pnchisq.c -o pnchisq.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qnchisq.c -o qnchisq.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dnbeta.c -o dnbeta.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pnbeta.c -o pnbeta.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qnbeta.c -o qnbeta.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pnf.c -o pnf.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c pnt.c -o pnt.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qnf.c -o qnf.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qnt.c -o qnt.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c ptukey.c -o ptukey.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qtukey.c -o qtukey.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c toms708.c -o toms708.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c wilcox.c -o wilcox.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c signrank.c -o signrank.o ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o ranlib libnmath.a make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/nmath' make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/nmath' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/unix' config.status: creating src/unix/Makefile make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/unix' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/unix' making Rembedded.d from Rembedded.c making dynload.d from dynload.c making system.d from system.c making sys-unix.d from sys-unix.c making sys-std.d from sys-std.c making X11.d from X11.c make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/unix' gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c Rembedded.c -o Rembedded.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dynload.c -o dynload.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c system.c -o system.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c sys-unix.c -o sys-unix.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c sys-std.c -o sys-std.o gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c X11.c -o X11.o ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o ranlib libunix.a make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/unix' make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/unix' gcc -std=gnu99 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -L/home/defrancaferr_joa/sage-7.5.1/local/lib -Wl,-rpath,/home/defrancaferr_joa/sage-7.5.1/local/lib -DR_HOME='"/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src"' \ -o Rscript ./Rscript.c make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/unix' make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/unix' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/main' config.status: creating src/main/Makefile make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/main' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/main' making CommandLineArgs.d from CommandLineArgs.c making Rdynload.d from Rdynload.c making Renviron.d from Renviron.c making RNG.d from RNG.c making agrep.d from agrep.c making apply.d from apply.c making arithmetic.d from arithmetic.c making array.d from array.c making attrib.d from attrib.c making bind.d from bind.c making builtin.d from builtin.c making character.d from character.c making coerce.d from coerce.c making colors.d from colors.c making complex.d from complex.c making connections.d from connections.c making context.d from context.c making cum.d from cum.c making dcf.d from dcf.c making datetime.d from datetime.c making debug.d from debug.c making deparse.d from deparse.c making devices.d from devices.c making dotcode.d from dotcode.c making dounzip.d from dounzip.c making dstruct.d from dstruct.c making duplicate.d from duplicate.c making edit.d from edit.c making engine.d from engine.c making envir.d from envir.c making errors.d from errors.c making eval.d from eval.c making format.d from format.c making gevents.d from gevents.c making gram.d from gram.c making gram-ex.d from gram-ex.c making graphics.d from graphics.c making grep.d from grep.c making identical.d from identical.c making inlined.d from inlined.c making inspect.d from inspect.c making internet.d from internet.c making iosupport.d from iosupport.c making lapack.d from lapack.c making list.d from list.c making localecharset.d from localecharset.c making logic.d from logic.c making main.d from main.c making mapply.d from mapply.c making match.d from match.c making memory.d from memory.c making names.d from names.c making objects.d from objects.c making options.d from options.c making paste.d from paste.c making platform.d from platform.c making plot.d from plot.c making plot3d.d from plot3d.c making plotmath.d from plotmath.c making print.d from print.c making printarray.d from printarray.c making printvector.d from printvector.c making printutils.d from printutils.c making qsort.d from qsort.c making random.d from random.c making raw.d from raw.c making registration.d from registration.c making relop.d from relop.c making rlocale.d from rlocale.c making saveload.d from saveload.c making scan.d from scan.c making seq.d from seq.c making serialize.d from serialize.c making sort.d from sort.c making source.d from source.c making split.d from split.c making sprintf.d from sprintf.c making startup.d from startup.c making subassign.d from subassign.c making subscript.d from subscript.c making subset.d from subset.c making summary.d from summary.c making sysutils.d from sysutils.c making times.d from times.c making unique.d from unique.c making util.d from util.c making version.d from version.c making g_alab_her.d from g_alab_her.c making g_cntrlify.d from g_cntrlify.c making g_fontdb.d from g_fontdb.c making g_her_glyph.d from g_her_glyph.c making Rmain.d from Rmain.c making alloca.d from alloca.c making mkdtemp.d from mkdtemp.c making strdup.d from strdup.c making strncasecmp.d from strncasecmp.c make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/main' gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c CommandLineArgs.c -o CommandLineArgs.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c Rdynload.c -o Rdynload.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c Renviron.c -o Renviron.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c RNG.c -o RNG.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c agrep.c -o agrep.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c apply.c -o apply.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c arithmetic.c -o arithmetic.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c array.c -o array.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c attrib.c -o attrib.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c bind.c -o bind.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c builtin.c -o builtin.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c character.c -o character.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c coerce.c -o coerce.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c colors.c -o colors.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c complex.c -o complex.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c connections.c -o connections.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c context.c -o context.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c cum.c -o cum.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dcf.c -o dcf.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c datetime.c -o datetime.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c debug.c -o debug.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c deparse.c -o deparse.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c devices.c -o devices.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dotcode.c -o dotcode.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dounzip.c -o dounzip.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dstruct.c -o dstruct.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c duplicate.c -o duplicate.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c edit.c -o edit.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c engine.c -o engine.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c envir.c -o envir.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c errors.c -o errors.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c eval.c -o eval.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c format.c -o format.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c gevents.c -o gevents.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c gram.c -o gram.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c gram-ex.c -o gram-ex.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c graphics.c -o graphics.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c grep.c -o grep.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c identical.c -o identical.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c inlined.c -o inlined.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c inspect.c -o inspect.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c internet.c -o internet.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c iosupport.c -o iosupport.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c lapack.c -o lapack.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c list.c -o list.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c localecharset.c -o localecharset.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c logic.c -o logic.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c main.c -o main.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c mapply.c -o mapply.o main.c: In function 'dummy_ii': main.c:1613:5: warning: function returns address of local variable [-Wreturn-local-addr] return (uintptr_t) ⅈ ^ gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c match.c -o match.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c memory.c -o memory.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c names.c -o names.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c objects.c -o objects.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c options.c -o options.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c paste.c -o paste.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c platform.c -o platform.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c plot.c -o plot.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c plot3d.c -o plot3d.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c plotmath.c -o plotmath.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c print.c -o print.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c printarray.c -o printarray.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c printvector.c -o printvector.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c printutils.c -o printutils.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c qsort.c -o qsort.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c random.c -o random.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c raw.c -o raw.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c registration.c -o registration.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c relop.c -o relop.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rlocale.c -o rlocale.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c saveload.c -o saveload.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c scan.c -o scan.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c seq.c -o seq.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c serialize.c -o serialize.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c sort.c -o sort.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c source.c -o source.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c split.c -o split.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c sprintf.c -o sprintf.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c startup.c -o startup.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c subassign.c -o subassign.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c subscript.c -o subscript.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c subset.c -o subset.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c summary.c -o summary.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c sysutils.c -o sysutils.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c times.c -o times.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c unique.c -o unique.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c util.c -o util.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c version.c -o version.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c g_alab_her.c -o g_alab_her.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c g_cntrlify.c -o g_cntrlify.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c g_fontdb.c -o g_fontdb.o gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c g_her_glyph.c -o g_her_glyph.o gfortran -fopenmp -fpic -g -O2 -c xxxpr.f -o xxxpr.o gcc -std=gnu99 -shared -fopenmp -L/home/defrancaferr_joa/sage-7.5.1/local/lib -Wl,-rpath,/home/defrancaferr_joa/sage-7.5.1/local/lib -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/pcre/libpcre.a ../extra/tre/libtre.a ../extra/xz/liblzma.a -L/home/defrancaferr_joa/sage-7.5.1/local/lib -lopenblas -lgfortran -lm -lquadmath -lreadline -lbz2 -lz -lrt -ldl -lm make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/main' mkdir -p -- /home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/bin/exec mkdir -p -- /home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/lib make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/main' make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/main' make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/main' gcc -std=gnu99 -I../../src/extra/pcre -I../../src/extra -I../../src/extra/xz/api -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c Rmain.c -o Rmain.o gcc -std=gnu99 -Wl,--export-dynamic -fopenmp -L../../lib -L/home/defrancaferr_joa/sage-7.5.1/local/lib -Wl,-rpath,/home/defrancaferr_joa/sage-7.5.1/local/lib -o R.bin Rmain.o -lR make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/main' make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/main' make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/main' make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/main' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules' make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/internet' make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/lapack' make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/X11' making Rhttpd.d from Rhttpd.c making Lapack.d from Lapack.c making libcurl.d from libcurl.c making Rsock.d from Rsock.c making devX11.d from devX11.c making internet.d from internet.c making rotated.d from rotated.c making rbitmap.d from rbitmap.c making nanoftp.d from nanoftp.c making nanohttp.d from nanohttp.c making sock.d from sock.c making sockconn.d from sockconn.c make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/lapack' gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c Lapack.c -o Lapack.o make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/internet' gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c Rsock.c -o Rsock.o gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c internet.c -o internet.o gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c libcurl.c -o libcurl.o gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c nanoftp.c -o nanoftp.o gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c nanohttp.c -o nanohttp.o gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c sock.c -o sock.o gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c sockconn.c -o sockconn.o make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/X11' gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -pthread -I/home/defrancaferr_joa/sage-7.5.1/local/include/freetype2 -I/home/defrancaferr_joa/sage-7.5.1/local/include/libpng12 -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/pixman-1 -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c devX11.c -o devX11.o gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -pthread -I/home/defrancaferr_joa/sage-7.5.1/local/include/freetype2 -I/home/defrancaferr_joa/sage-7.5.1/local/include/libpng12 -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/pixman-1 -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rotated.c -o rotated.o gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -pthread -I/home/defrancaferr_joa/sage-7.5.1/local/include/freetype2 -I/home/defrancaferr_joa/sage-7.5.1/local/include/libpng12 -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/pixman-1 -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rbitmap.c -o rbitmap.o gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -pthread -I/home/defrancaferr_joa/sage-7.5.1/local/include/freetype2 -I/home/defrancaferr_joa/sage-7.5.1/local/include/libpng12 -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/pixman-1 -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dataentry.c -o dataentry.o gcc -std=gnu99 -shared -L../../../lib -L/home/defrancaferr_joa/sage-7.5.1/local/lib -Wl,-rpath,/home/defrancaferr_joa/sage-7.5.1/local/lib -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o nanoftp.o nanohttp.o sock.o sockconn.o -lR make[8]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/internet' mkdir -p -- /home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/modules make[8]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/internet' make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/internet' make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/internet' gcc -std=gnu99 -shared -L../../../lib -L/home/defrancaferr_joa/sage-7.5.1/local/lib -Wl,-rpath,/home/defrancaferr_joa/sage-7.5.1/local/lib -o lapack.so Lapack.o -lR -L/home/defrancaferr_joa/sage-7.5.1/local/lib -lopenblas -L/home/defrancaferr_joa/sage-7.5.1/local/lib -lopenblas -lgfortran -lm -lquadmath make[8]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/lapack' make[8]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/lapack' make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/lapack' make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/lapack' gcc -std=gnu99 -shared -L../../../lib -L/home/defrancaferr_joa/sage-7.5.1/local/lib -Wl,-rpath,/home/defrancaferr_joa/sage-7.5.1/local/lib -o R_de.so dataentry.o -lSM -lICE -pthread -L/home/defrancaferr_joa/sage-7.5.1/local/lib -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lgmodule-2.0 -lgthread-2.0 -lrt -lglib-2.0 -lpng12 -lz -lcairo -lX11 -lX11 -lXt -lXmu -lR -lm gcc -std=gnu99 -shared -L../../../lib -L/home/defrancaferr_joa/sage-7.5.1/local/lib -Wl,-rpath,/home/defrancaferr_joa/sage-7.5.1/local/lib -o R_X11.so devX11.o rotated.o rbitmap.o -lSM -lICE -pthread -L/home/defrancaferr_joa/sage-7.5.1/local/lib -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lgmodule-2.0 -lgthread-2.0 -lrt -lglib-2.0 -lpng12 -lz -lcairo -lX11 -lX11 -lXt -lXmu -ljpeg -lpng -lz -lR -lm make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/X11' make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/X11' make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/X11' make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules/X11' make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/modules' make[5]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library' mkdir -p -- ../../library make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/profile' building system startup profile mkdir -p -- ../../../library/base/R make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/profile' make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/translations' building package 'translations' mkdir -p -- ../../../library/translations make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/translations' make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/translations' make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/translations' make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/base' building package 'base' make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/base' mkdir -p -- ../../../library/base/demo make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/base' make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/base' make[6]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/tools' building package 'tools' mkdir -p -- ../../../library/tools make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/tools' mkdir -p -- ../../../library/tools/R make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/tools' make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/tools' make[8]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/tools/src' making init.d from init.c making text.d from text.c making Rmd5.d from Rmd5.c making md5.d from md5.c making signals.d from signals.c making install.d from install.c making getfmts.d from getfmts.c making http.d from http.c making gramLatex.d from gramLatex.c making gramRd.d from gramRd.c gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -c text.c -o text.o gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -c Rmd5.c -o Rmd5.o gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -c md5.c -o md5.o gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -c signals.c -o signals.o gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -c install.c -o install.o gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -c getfmts.c -o getfmts.o gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -c http.c -o http.o gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -c gramLatex.c -o gramLatex.o gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -c gramRd.c -o gramRd.o gcc -std=gnu99 -shared -L../../../../lib -L/home/defrancaferr_joa/sage-7.5.1/local/lib -Wl,-rpath,/home/defrancaferr_joa/sage-7.5.1/local/lib -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o -L../../../../lib -lR make[9]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/tools/src' mkdir -p -- ../../../../library/tools/libs make[9]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/tools/src' make[8]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/tools/src' make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/tools' make[7]: Entering directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/tools' installing 'sysdata.rda' /home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/bin/exec/R: /home/mmsim/tools/lib/64bit/libgomp.so.1: version `GOMP_4.0' not found (required by /home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/lib/libR.so) make[7]: *** [sysdata] Error 1 make[7]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/tools' make[6]: *** [all] Error 2 make[6]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library/tools' make[5]: *** [R] Error 1 make[5]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src/library' make[4]: *** [R] Error 1 make[4]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src/src' make[3]: *** [R] Error 1 make[3]: Leaving directory `/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0/src' Error building R. real 1m25.535s user 2m3.739s sys 0m24.789s ************************************************************************ Error installing package r-3.2.4-revised.p0 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the relevant part of the log file /home/defrancaferr_joa/sage-7.5.1/logs/pkgs/r-3.2.4-revised.p0.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/defrancaferr_joa/sage-7.5.1/local/var/tmp/sage/build/r-3.2.4-revised.p0' && '/home/defrancaferr_joa/sage-7.5.1/sage' --sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************
