I have the same kind of problem on a RHEL 7.4 system. After investigating
the issue, it appears that some Makefiles are trying to rebuild files (such
as Makefile.in) because they are out-of-date with respect to their
dependencies (such as Makefile.am) because, although they exist, their
timestamp makes it appear that it needs to be rebuilt. It looks like in the
process of untarring the upstream tarballs the timestamps aren't preserved,
so they may be rebuilt erroneously.
It's odd that I hit different errors on a different runs, but patch-2.7.5
often fails with:
[patch-2.7.5] Building patch-2.7.5
[patch-2.7.5] make[2]: Entering directory
`/gpfs/loomis/home.grace/fas/hpcprog/sw464/sage-8.3/local/var/tmp/sage/build/patch-2.7.5/src'
[patch-2.7.5] CDPATH="${ZSH_VERSION+.}:" && cd . && /usr/bin/bash
/gpfs/loomis/home.grace/fas/hpcprog/sw464/sage-8.3/local/var/tmp/sage/build/patch-2.7.5/src/build-aux/missing
aclocal-1.14 -I m4
[patch-2.7.5]
/gpfs/loomis/home.grace/fas/hpcprog/sw464/sage-8.3/local/var/tmp/sage/build/patch-2.7.5/src/build-aux/missing:
line 81: aclocal-1.14: command not found
[patch-2.7.5] WARNING: 'aclocal-1.14' is missing on your system.
[patch-2.7.5] You should only need it if you modified
'acinclude.m4' or
[patch-2.7.5] 'configure.ac' or m4 files included by
'configure.ac'.
[patch-2.7.5] The 'aclocal' program is part of the GNU Automake
package:
[patch-2.7.5] <http://www.gnu.org/software/automake>
[patch-2.7.5] It also requires GNU Autoconf, GNU m4 and Perl in
order to run:
[patch-2.7.5] <http://www.gnu.org/software/autoconf>
[patch-2.7.5] <http://www.gnu.org/software/m4/>
[patch-2.7.5] <http://www.perl.org/>
[patch-2.7.5] make[2]: *** [aclocal.m4] Error 127
[patch-2.7.5] make[2]: Leaving directory
`/gpfs/loomis/home.grace/fas/hpcprog/sw464/sage-8.3/local/var/tmp/sage/build/patch-2.7.5/src'
[patch-2.7.5]
********************************************************************************
[patch-2.7.5] Error building patch-2.7.5
Here's a listing of the timestamps where the make failure occurred:
$ ls -l
total 3520
-rw-r--r-- 1 sw464 hpcprog 67297 Sep 7 18:37 aclocal.m4
-rw-r--r-- 1 sw464 hpcprog 335 Sep 7 18:37 AUTHORS
-rwxr-xr-x 1 sw464 hpcprog 29454 Sep 7 18:37 bootstrap
drwxr-xr-x 3 sw464 hpcprog 4096 Sep 7 18:37 build-aux
-rw-r--r-- 1 sw464 hpcprog 1320 Sep 7 18:37 cfg.mk
-rw-r--r-- 1 sw464 hpcprog 47117 Sep 7 18:37 ChangeLog
-rw-r--r-- 1 sw464 hpcprog 142258 Sep 7 18:37 ChangeLog-2011
-rw-rw-r-- 1 sw464 hpcprog 63448 Sep 7 18:37 config.h
-rw-r--r-- 1 sw464 hpcprog 61280 Sep 7 18:37 config.hin
-rw-rw-r-- 1 sw464 hpcprog 417883 Sep 7 18:37 config.log
-rwxrwxr-x 1 sw464 hpcprog 68741 Sep 7 18:37 config.status
-rwxr-xr-x 1 sw464 hpcprog 657356 Sep 7 18:37 configure
-rw-r--r-- 1 sw464 hpcprog 5731 Sep 7 18:37 configure.ac
[snip]
The timestamps of the files in the upstream tarball are quite different,
and don't cause "make" to trigger any rebuilds that require automake.
So what's going on during the installation process that causes this problem
on RHEL 7.4, and possibly Debian 7 as well? I'm using a GPFS file system.
Could that cause this problem?
On Friday, August 10, 2018 at 2:18:55 PM UTC-4, wout.d...@gmail.com wrote:
>
> This is what I try to do:
> wget ftp://ftp.fu-berlin.de/unix/misc/sage/src/sage-8.3.tar.gz
> tar -xzf sage-8.3.tar.gz
> cd sage-8.3
> ./bootstrap
> ./configure --prefix=./local/sage
> make
>
> I get the following errors when it is installing the Sage packages:
>
> .../sage/var/tmp/sage/build/mpfr-4.0.1/src/missing: line 81:
> automake-1.15: command not found
> WARNING: 'automake-1.15' is missing on your system.
> You should only need it if you modified 'Makefile.am' or
> 'configure.ac' or m4 files included by 'configure.ac'.
> The 'automake' program is part of the GNU Automake package:
> <http://www.gnu.org/software/automake>
> It also requires GNU Autoconf, GNU m4 and Perl in order to run:
> <http://www.gnu.org/software/autoconf>
> <http://www.gnu.org/software/m4/>
> <http://www.perl.org/>
> make[5]: *** [Makefile.in] Error 127
>
> ...
>
> .../sage/var/tmp/sage/build/patch-2.7.5/src/build-aux/missing: line 81:
> automake-1.14: command not found
> WARNING: 'automake-1.14' is missing on your system.
> You should only need it if you modified 'Makefile.am' or
> 'configure.ac' or m4 files included by 'configure.ac'.
> The 'automake' program is part of the GNU Automake package:
> <http://www.gnu.org/software/automake>
> It also requires GNU Autoconf, GNU m4 and Perl in order to run:
> <http://www.gnu.org/software/autoconf>
> <http://www.gnu.org/software/m4/>
> <http://www.perl.org/>
> make[4]: *** [Makefile.in] Error 127
>
> ...
>
> .../sage/var/tmp/sage/build/patch-2.7.5/src/build-aux/missing: line 81:
> aclocal-1.14: command not found
> WARNING: 'aclocal-1.14' is missing on your system.
> You should only need it if you modified 'acinclude.m4' or
> 'configure.ac' or m4 files included by 'configure.ac'.
> The 'aclocal' program is part of the GNU Automake package:
> <http://www.gnu.org/software/automake>
> It also requires GNU Autoconf, GNU m4 and Perl in order to run:
> <http://www.gnu.org/software/autoconf>
> <http://www.gnu.org/software/m4/>
> <http://www.perl.org/>
> make[2]: *** [aclocal.m4] Error 127
>
>
> The system's automake version is 1.11.
>
> I tried "autoreconf -ivf" instead of bootstrap but this doesn't change
> anything (basically the same thing).
>
> I also tried installing automake 1.14 and 1.15 which results in similar
> messages by other packages related to a missing automake or aclocal version.
>
> Any ideas?
>
>
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