Dear Vincent,
Running the code you suggest gives
"
sage: import os.path
sage: from sage.env import SAGE_DOC
sage: print(SAGE_DOC)
/localhome/home/pmtad/miniforge3/envs/sage-dev/share/doc/sage
sage: os.path.isdir(SAGE_DOC)
False
"
I don't think this miniforge environment does have Sage installed
independently, I really just set it up using the
environment-3.12-linux.yml, I cannot see any other Sage packages when
looking at the sage-dev environment, and trying "mamba remove sagelib"
gives
"
Transaction
Prefix: /localhome/home/pmtad/miniforge3/envs/sage-dev
Failure: packages to remove not found in the environment:
- sagelib
Transaction starting
Transaction finished
"
I recall having a version of Sage built from source via a different
mechanism a while ago, so perhaps that has broken some links?
On Monday, June 9, 2025 at 8:16:14 PM UTC+1 vdelecroix wrote:
> Dear Linden,
>
> The error is kind of strange
>
> > File "/localhome/home/pmtad/sage/src/sage_docbuild/build_options.py",
> line 12, in <module>
> > LANGUAGES = [d for d in os.listdir(SAGE_DOC_SRC) if
> re.match('^[a-z][a-z]$', d)]
> > ^^^^^^^^^^^^^^^^^^^^^^^^
> > FileNotFoundError: [Errno 2] No such file or directory:
> '/localhome/home/pmtad/miniforge3/envs/sage-dev/share/doc/sage'
>
> It seems that you prior to your compilation you installed sage in your
> miniforge environment. The latter seems to interfere with the source
> code. Can you reproduce the weird behavior by
>
> 1) starting the sage console that you just built
> 2) post the outputs of the following commands
>
> sage: import os.path
> sage: from sage.env import SAGE_DOC
> sage: print(SAGE_DOC)
> sage: os.path.isdir(SAGE_DOC)
>
> One work around is to uninstall sagelib from your miniforge environment.
>
> Vincent
>
> On Mon, 9 Jun 2025 at 16:29, Linden Disney <[email protected]> wrote:
> >
> > Hello,
> >
> > I have installed Sage following
> https://doc.sagemath.org/html/en/installation/conda.html#using-conda-to-provide-all-dependencies-for-the-sage-library
>
> and the process was successful, with all tests passing. Trying to build the
> documentation now gives me an error.
> >
> > Running "pip install --no-build-isolation -v -v --editable
> ./pkgs/sage-docbuild/" is successful (output pasted below for
> completeness), installing doc-build-10.7b2 in mamba (checked via "mamba
> list").
> >
> > Running "sage --docbuild all html" fails saying
> >
> > "
> > Traceback (most recent call last):
> > File "<frozen runpy>", line 198, in _run_module_as_main
> > File "<frozen runpy>", line 88, in _run_code
> > File "/localhome/home/pmtad/sage/src/sage_docbuild/__main__.py", line
> 82, in <module>
> > from .builders import DocBuilder, ReferenceBuilder, get_builder,
> get_documents
> > File "/localhome/home/pmtad/sage/src/sage_docbuild/builders.py", line
> 80, in <module>
> > from . import build_options
> > File "/localhome/home/pmtad/sage/src/sage_docbuild/build_options.py",
> line 12, in <module>
> > LANGUAGES = [d for d in os.listdir(SAGE_DOC_SRC) if
> re.match('^[a-z][a-z]$', d)]
> > ^^^^^^^^^^^^^^^^^^^^^^^^
> > FileNotFoundError: [Errno 2] No such file or directory:
> '/localhome/home/pmtad/miniforge3/envs/sage-dev/share/doc/sage'
> > "
> >
> > I am using Sage version 10.7.beta2, Python 3.12.9, on Red Hat Enterprise
> Linux release 8.10.
> >
> > Cheers in advance for any help!
> >
> > Kind regards, Linden
> >
> >
> > Using pip 25.0.1 from
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages/pip
>
> (python 3.12)
> > Non-user install because site-packages writeable
> > Created temporary directory: /tmp/pip-build-tracker-ao4fc1_t
> > Initialized build tracking at /tmp/pip-build-tracker-ao4fc1_t
> > Created build tracker: /tmp/pip-build-tracker-ao4fc1_t
> > Entered build tracker: /tmp/pip-build-tracker-ao4fc1_t
> > Created temporary directory: /tmp/pip-install-jkquhszf
> > Created temporary directory: /tmp/pip-ephem-wheel-cache-jug0lz1h
> > Obtaining file:///localhome/home/pmtad/sage/pkgs/sage-docbuild
> > Added file:///localhome/home/pmtad/sage/pkgs/sage-docbuild to build
> tracker '/tmp/pip-build-tracker-ao4fc1_t'
> > Running command Checking if build backend supports build_editable
> > Checking if build backend supports build_editable ... done
> > Created temporary directory: /tmp/pip-modern-metadata-bgm7_f7a
> > Running command Preparing editable metadata (pyproject.toml)
> > running dist_info
> > creating /tmp/pip-modern-metadata-bgm7_f7a/sage_docbuild.egg-info
> > writing /tmp/pip-modern-metadata-bgm7_f7a/sage_docbuild.egg-info/PKG-INFO
> > writing dependency_links to
> /tmp/pip-modern-metadata-bgm7_f7a/sage_docbuild.egg-info/dependency_links.txt
> > writing requirements to
> /tmp/pip-modern-metadata-bgm7_f7a/sage_docbuild.egg-info/requires.txt
> > writing top-level names to
> /tmp/pip-modern-metadata-bgm7_f7a/sage_docbuild.egg-info/top_level.txt
> > writing manifest file
> '/tmp/pip-modern-metadata-bgm7_f7a/sage_docbuild.egg-info/SOURCES.txt'
> > reading manifest file
> '/tmp/pip-modern-metadata-bgm7_f7a/sage_docbuild.egg-info/SOURCES.txt'
> > reading manifest template 'MANIFEST.in'
> > writing manifest file
> '/tmp/pip-modern-metadata-bgm7_f7a/sage_docbuild.egg-info/SOURCES.txt'
> > creating
> '/tmp/pip-modern-metadata-bgm7_f7a/sage_docbuild-10.7b2.dist-info'
> > Preparing editable metadata (pyproject.toml) ... done
> > Source in ./pkgs/sage-docbuild has version 10.7b2, which satisfies
> requirement sage-docbuild==10.7b2 from
> file:///localhome/home/pmtad/sage/pkgs/sage-docbuild
> > Removed sage-docbuild==10.7b2 from
> file:///localhome/home/pmtad/sage/pkgs/sage-docbuild from build tracker
> '/tmp/pip-build-tracker-ao4fc1_t'
> > Requirement already satisfied: sphinx in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sage-docbuild==10.7b2) (8.2.3)
> > Requirement already satisfied: sphinx-copybutton in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sage-docbuild==10.7b2) (0.5.2)
> > Requirement already satisfied: sphinxcontrib-applehelp>=1.0.7 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (2.0.0)
> > Requirement already satisfied: sphinxcontrib-devhelp>=1.0.6 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (2.0.0)
> > Requirement already satisfied: sphinxcontrib-htmlhelp>=2.0.6 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (2.1.0)
> > Requirement already satisfied: sphinxcontrib-jsmath>=1.0.1 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (1.0.1)
> > Requirement already satisfied: sphinxcontrib-qthelp>=1.0.6 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (2.0.0)
> > Requirement already satisfied: sphinxcontrib-serializinghtml>=1.1.9 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (1.1.10)
> > Requirement already satisfied: Jinja2>=3.1 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (3.1.6)
> > Requirement already satisfied: Pygments>=2.17 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (2.19.1)
> > Requirement already satisfied: docutils<0.22,>=0.20 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (0.21.2)
> > Requirement already satisfied: snowballstemmer>=2.2 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (2.2.0)
> > Requirement already satisfied: babel>=2.13 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (2.17.0)
> > Requirement already satisfied: alabaster>=0.7.14 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (1.0.0)
> > Requirement already satisfied: imagesize>=1.3 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (1.4.1)
> > Requirement already satisfied: requests>=2.30.0 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (2.32.3)
> > Requirement already satisfied: roman-numerals-py>=1.0.0 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (3.1.0)
> > Requirement already satisfied: packaging>=23.0 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from sphinx->sage-docbuild==10.7b2) (24.2)
> > Requirement already satisfied: MarkupSafe>=2.0 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from Jinja2>=3.1->sphinx->sage-docbuild==10.7b2) (3.0.2)
> > Requirement already satisfied: charset_normalizer<4,>=2 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from requests>=2.30.0->sphinx->sage-docbuild==10.7b2) (3.4.1)
> > Requirement already satisfied: idna<4,>=2.5 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from requests>=2.30.0->sphinx->sage-docbuild==10.7b2) (3.10)
> > Requirement already satisfied: urllib3<3,>=1.21.1 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from requests>=2.30.0->sphinx->sage-docbuild==10.7b2) (1.26.19)
> > Requirement already satisfied: certifi>=2017.4.17 in
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages
> (from requests>=2.30.0->sphinx->sage-docbuild==10.7b2) (2025.1.31)
> > Created temporary directory: /tmp/pip-unpack-ewr4_0yw
> > Building wheels for collected packages: sage-docbuild
> > Created temporary directory: /tmp/pip-wheel-p7w877g8
> > Destination directory: /tmp/pip-wheel-p7w877g8
> > Running command Building editable for sage-docbuild (pyproject.toml)
> > running editable_wheel
> > creating /tmp/pip-wheel-p7w877g8/.tmp-6zs2uefq/sage_docbuild.egg-info
> > writing
> /tmp/pip-wheel-p7w877g8/.tmp-6zs2uefq/sage_docbuild.egg-info/PKG-INFO
> > writing dependency_links to
> /tmp/pip-wheel-p7w877g8/.tmp-6zs2uefq/sage_docbuild.egg-info/dependency_links.txt
> > writing requirements to
> /tmp/pip-wheel-p7w877g8/.tmp-6zs2uefq/sage_docbuild.egg-info/requires.txt
> > writing top-level names to
> /tmp/pip-wheel-p7w877g8/.tmp-6zs2uefq/sage_docbuild.egg-info/top_level.txt
> > writing manifest file
> '/tmp/pip-wheel-p7w877g8/.tmp-6zs2uefq/sage_docbuild.egg-info/SOURCES.txt'
> > reading manifest file
> '/tmp/pip-wheel-p7w877g8/.tmp-6zs2uefq/sage_docbuild.egg-info/SOURCES.txt'
> > reading manifest template 'MANIFEST.in'
> > writing manifest file
> '/tmp/pip-wheel-p7w877g8/.tmp-6zs2uefq/sage_docbuild.egg-info/SOURCES.txt'
> > creating
> '/tmp/pip-wheel-p7w877g8/.tmp-6zs2uefq/sage_docbuild-10.7b2.dist-info'
> > creating
> /tmp/pip-wheel-p7w877g8/.tmp-6zs2uefq/sage_docbuild-10.7b2.dist-info/WHEEL
> > running build_py
> > Editable install will be performed using a meta path finder.
> >
> > Options like `package-data`, `include/exclude-package-data` or
> > `packages.find.exclude/include` may have no effect.
> >
> > adding '__editable___sage_docbuild_10_7b2_finder.py'
> > adding '__editable__.sage_docbuild-10.7b2.pth'
> > creating
> '/tmp/pip-wheel-p7w877g8/.tmp-6zs2uefq/sage_docbuild-10.7b2-0.editable-py3-none-any.whl'
>
> and adding
> '/tmp/tmpp2zgwwqisage_docbuild-10.7b2-0.editable-py3-none-any.whl' to it
> > adding 'sage_docbuild-10.7b2.dist-info/METADATA'
> > adding 'sage_docbuild-10.7b2.dist-info/WHEEL'
> > adding 'sage_docbuild-10.7b2.dist-info/top_level.txt'
> > adding 'sage_docbuild-10.7b2.dist-info/RECORD'
> >
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages/setuptools/command/editable_wheel.py:342:
>
> InformationOnly: Editable installation.
> > !!
> >
> >
> ********************************************************************************
> > Please be careful with folders in your working directory with the same
> > name as your package as they may take precedence during imports.
> >
> ********************************************************************************
> >
> > !!
> > with strategy, WheelFile(wheel_path, "w") as wheel_obj:
> > Building editable for sage-docbuild (pyproject.toml) ... done
> > Created wheel for sage-docbuild:
> filename=sage_docbuild-10.7b2-0.editable-py3-none-any.whl size=3537
> sha256=4102daf7b51803b934cf1e2a00a950b1c87a0c2912a05c355ee3345f71b61173
> > Stored in directory:
> /tmp/pip-ephem-wheel-cache-jug0lz1h/wheels/bd/a5/69/5180bcabf2b1c61832f4fedd3d598bca326dc8e2cb16485c0e
> > Successfully built sage-docbuild
> > Installing collected packages: sage-docbuild
> > Attempting uninstall: sage-docbuild
> > Found existing installation: sage-docbuild 10.7b2
> > Uninstalling sage-docbuild-10.7b2:
> > Created temporary directory: /tmp/pip-uninstall-vnctt74o
> > Removing file or directory
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages/__editable__.sage_docbuild-10.7b2.pth
> > Removing file or directory
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages/__editable___sage_docbuild_10_7b2_finder.py
> > Removing file or directory
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages/__pycache__/__editable___sage_docbuild_10_7b2_finder.cpython-312.pyc
> > Created temporary directory:
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages/~age_docbuild-10.7b2.dist-info
> > Removing file or directory
> /localhome/home/pmtad/miniforge3/envs/sage-dev/lib/python3.12/site-packages/sage_docbuild-10.7b2.dist-info/
> > Successfully uninstalled sage-docbuild-10.7b2
> >
> > Successfully installed sage-docbuild-10.7b2
> > Remote version of pip: 25.1.1
> > Local version of pip: 25.0.1
> > Was pip installed by pip? False
> > Removed build tracker: '/tmp/pip-build-tracker-ao4fc1_t'
> >
> >
> >
> >
> >
> > --
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