#11334: Update numpy to 1.7.0
--------------------------------------------------------------+-------------
Reporter: jason | Owner:
tbd
Type: task | Status:
needs_work
Priority: major | Milestone:
sage-5.9
Component: packages: standard | Resolution:
Keywords: sd40.5 | Work issues:
Report Upstream: Fixed upstream, in a later stable release. | Reviewers:
Authors: | Merged in:
Dependencies: #12415, #13992 | Stopgaps:
--------------------------------------------------------------+-------------
Comment (by strogdon):
I've now tested 5.9.beta3 on two different machines and I get the
following numpy-related warnings which I also saw with 5.9.beta2.
{{{
./sage -t --long devel/sage/sage/matrix/matrix2.pyx
devel/sage/sage/symbolic/expression.pyx
Running doctests with ID 2013-04-04-12-42-24-9b2fa346.
Doctesting 2 files.
sage -t --long devel/sage/sage/matrix/matrix2.pyx
**********************************************************************
File "devel/sage/sage/matrix/matrix2.pyx", line 11476, in
sage.matrix.matrix2.Matrix.diagonal.plot
Failed example:
A.plot()
Expected nothing
Got:
doctest:146: RuntimeWarning: numpy.dtype size changed, may indicate
binary incompatibility
doctest:146: RuntimeWarning: numpy.ufunc size changed, may indicate
binary incompatibility
doctest:3: RuntimeWarning: numpy.dtype size changed, may indicate
binary incompatibility
doctest:3: RuntimeWarning: numpy.ufunc size changed, may indicate
binary incompatibility
doctest:148: RuntimeWarning: numpy.dtype size changed, may indicate
binary incompatibility
doctest:148: RuntimeWarning: numpy.ufunc size changed, may indicate
binary incompatibility
doctest:150: RuntimeWarning: numpy.dtype size changed, may indicate
binary incompatibility
doctest:150: RuntimeWarning: numpy.ufunc size changed, may indicate
binary incompatibility
<BLANKLINE>
**********************************************************************
1 item had failures:
1 of 7 in sage.matrix.matrix2.Matrix.diagonal.plot
[2000 tests, 1 failure, 38.68 s]
sage -t --long devel/sage/sage/symbolic/expression.pyx
**********************************************************************
File "devel/sage/sage/symbolic/expression.pyx", line 8747, in
sage.symbolic.expression.Expression.find_root
Failed example:
f.find_root(-2, 3)
Expected:
1.0
Got:
doctest:146: RuntimeWarning: numpy.dtype size changed, may indicate
binary incompatibility
doctest:146: RuntimeWarning: numpy.ufunc size changed, may indicate
binary incompatibility
doctest:3: RuntimeWarning: numpy.dtype size changed, may indicate
binary incompatibility
doctest:3: RuntimeWarning: numpy.ufunc size changed, may indicate
binary incompatibility
doctest:148: RuntimeWarning: numpy.dtype size changed, may indicate
binary incompatibility
doctest:148: RuntimeWarning: numpy.ufunc size changed, may indicate
binary incompatibility
doctest:150: RuntimeWarning: numpy.dtype size changed, may indicate
binary incompatibility
doctest:150: RuntimeWarning: numpy.ufunc size changed, may indicate
binary incompatibility
1.0
**********************************************************************
1 item had failures:
1 of 29 in sage.symbolic.expression.Expression.find_root
[2041 tests, 1 failure, 36.88 s]
----------------------------------------------------------------------
sage -t --long devel/sage/sage/matrix/matrix2.pyx # 1 doctest failed
sage -t --long devel/sage/sage/symbolic/expression.pyx # 1 doctest failed
----------------------------------------------------------------------
Total time for all tests: 77.1 seconds
cpu time: 72.3 seconds
cumulative wall time: 75.6 seconds
}}}
What is really odd is that the seemingly offending lines when run from the
Sage prompt give _no_ warnings. And I don't see where in the .pyx files
{{{RuntimeWarnings}}} are explicitly turned on or off. It is as if
warnings are only being turned on during doctesting or perhaps something
else is up.
--
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/11334#comment:114>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica,
and MATLAB
--
You received this message because you are subscribed to the Google Groups
"sage-trac" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to [email protected].
To post to this group, send email to [email protected].
Visit this group at http://groups.google.com/group/sage-trac?hl=en.
For more options, visit https://groups.google.com/groups/opt_out.
