#15045: ATLAS: multiple definition of `ATL_SetAtomicCount'
----------------------------------+-----------------------------
   Reporter:  jdemeyer            |            Owner:
       Type:  defect              |           Status:  new
   Priority:  blocker             |        Milestone:  sage-5.12
  Component:  packages: standard  |         Keywords:
  Merged in:                      |          Authors:
  Reviewers:                      |  Report Upstream:  N/A
Work issues:                      |           Branch:
     Commit:                      |     Dependencies:
   Stopgaps:                      |
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 This non-reproducible problem which can occur during the ATLAS build (with
 atlas-3.10.1.p3.spkg from #14754) was supposed to be fixed but it actually
 is not fixed:
 {{{
 make[5]: Entering directory
 
`/home/buildbot/build/sage/lena-1/lena_full/build/sage-5.12.beta1/spkg/build/atlas-3.10.1.p3
 /ATLAS-build/lib'
 gcc -fPIC -m64 -shared -o libsatlas.so  \
            -Wl,"rpath-link
 /home/buildbot/build/sage/lena-1/lena_full/build/sage-5.12.beta1/local/lib"
 \
            -Wl,--whole-archive liblapack.a libf77blas.a libcblas.a
 libatlas.a -Wl,--no-whole-archive
 -L/usr/local/gcc-4.7.0/x86_64-Linux-k10-fc/lib/gcc/x86_64-unknown-linux-
 gnu/4.7.0/../../../../lib64 -lgfortran  -lc -lpthread -lm -lgcc
 /usr/local/binutils-2.22/x86_64-Linux-k10-fc-gcc-4.6.2-rh/bin/ld: cannot
 find rpath-link
 /home/buildbot/build/sage/lena-1/lena_full/build/sage-5.12.beta1/local/lib:
 No such file or directory
 libatlas.a(ATL_SetAtomicCount_mut.o): In function `ATL_SetAtomicCount':
 ATL_SetAtomicCount_mut.c:(.text+0x0): multiple definition of
 `ATL_SetAtomicCount'
 libatlas.a(ATL_SetAtomicCount_arch.o):ATL_SetAtomicCount_arch.c:(.text+0x0):
 first defined here
 libatlas.a(ATL_ResetAtomicCount_mut.o): In function
 `ATL_ResetAtomicCount':
 ATL_ResetAtomicCount_mut.c:(.text+0x0): multiple definition of
 `ATL_ResetAtomicCount'
 libatlas.a(ATL_ResetAtomicCount_amd64.o):(.text+0x0): first defined here
 libatlas.a(ATL_DecAtomicCount_mut.o): In function `ATL_DecAtomicCount':
 ATL_DecAtomicCount_mut.c:(.text+0x0): multiple definition of
 `ATL_DecAtomicCount'
 libatlas.a(ATL_DecAtomicCount_amd64.o):(.text+0x0): first defined here
 libatlas.a(ATL_FreeAtomicCount_mut.o): In function `ATL_FreeAtomicCount':
 ATL_FreeAtomicCount_mut.c:(.text+0x0): multiple definition of
 `ATL_FreeAtomicCount'
 libatlas.a(ATL_FreeAtomicCount_arch.o):ATL_FreeAtomicCount_arch.c:(.text+0x0):
 first defined here
 collect2: error: ld returned 1 exit status
 make[5]: *** [GCCTRY] Error 1
 }}}

 
[http://build.sagemath.org/sage/builders/Skynet%20lena%20%28Fedora%2016%20x86_64%29/builds/174/steps/shell_5/logs/atlas
 full ATLAS build log]

--
Ticket URL: <http://trac.sagemath.org/ticket/15045>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica, 
and MATLAB

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