#6278: linbox-1.1.6 fails to build in sage 4.0.1 with Solaris and gcc 4.4.0
----------------------+-----------------------------------------------------
Reporter: drkirkby | Owner: tbd
Type: defect | Status: new
Priority: blocker | Milestone: sage-4.0.2
Component: solaris | Keywords:
Reviewer: | Author:
Merged: |
----------------------+-----------------------------------------------------
I noticed an error building linbox on the 16-core Sun T5240 't2' which
currently runs Solaris 10 update 4 and uses gcc 4.4.0.
It would appear that linbox needs blas library, which the configure script
does not find. Looking at the list of installed packages, this is true.
The 'blas-20070724.spkg' has NOT been built. Only the following have been
built at the time linbox attempted to compile.
{{{
atlas-3.8.3.p2
bzip2-1.0.5
conway_polynomials-0.2
dir-0.1
eclib-20080310.p7
elliptic_curves-0.1
extcode-4.0.1.alpha0
flint-1.2.4.p3
fortran-20071120.p5
freetype-2.3.5.p0
gd-2.0.35.p1
gdmodule-0.56.p5
givaro-3.2.13rc2
gnutls-2.2.1.p1
graphs-20070722
gsl-1.10.p1
iml-1.0.1.p11
ipython-0.9.1
lapack-20071123.p0
libgcrypt-1.4.3.p0
libgpg_error-1.6.p0
libpng-1.2.35
mpir-1.2.p0
ntl-5.4.2.p7
opencdk-0.6.6
pari-2.3.3.p0
prereq-0.3
python-2.5.4.p1
readline-5.2.p6
sage_scripts-4.0.1.alpha0
sqlite-3.5.3.p3
termcap-1.3.1.p0
zlib-1.2.3.p4
}}}
I'm a bit puzzled by this one. I would not have thought this to be a
Solaris-specific issue, so why it should not have been caught earlier by
others I don't know.
{{{
Machine:
SunOS t2 5.10 Generic_127111-09 sun4v sparc SUNW,T5240
Deleting directories from past builds of previous/current versions of
linbox-1.1.6
Extracting package
/home/kirkby/sage-4.0.1.alpha0/spkg/standard/linbox-1.1.6.spkg ...
-rw-r--r-- 1 kirkby 1093 1577140 May 15 18:42
/home/kirkby/sage-4.0.1.alpha0/spkg/standard/linbox-1.1.6.spkg
linbox-1.1.6/
linbox-1.1.6/spkg-rebuild
linbox-1.1.6/.hgignore
linbox-1.1.6/.hg/
linbox-1.1.6/.hg/dirstate
linbox-1.1.6/.hg/requires
linbox-1.1.6/.hg/store/
linbox-1.1.6/.hg/store/undo
linbox-1.1.6/.hg/store/data/
<SNIP >
linbox-1.1.6/src/examples/sparseelimrank.C
linbox-1.1.6/src/examples/valence.C
linbox-1.1.6/src/examples/fields/
linbox-1.1.6/src/examples/fields/Makefile.am
linbox-1.1.6/src/examples/fields/Makefile.in
linbox-1.1.6/src/examples/fields/ex-fields.C
linbox-1.1.6/src/examples/fields/ex-fields-archetype.C
linbox-1.1.6/src/examples/fields/modular-int.C
Finished extraction
****************************************************
Host system
uname -a:
SunOS t2 5.10 Generic_127111-09 sun4v sparc SUNW,T5240
****************************************************
****************************************************
GCC Version
gcc -v
Using built-in specs.
Target: sparc-sun-solaris2.10
Configured with: ../gcc-4.4.0/configure --with-gnu-as --with-
as=/home/kirkby/bin/as --with-gnu-ld --with-ld=/home/kirkby/bin/ld --with-
gmp=/home/kirkby/dependencies/ --with-mpfr=/home/kirkby/dependencies/
--enable-languages=c,c++,fortran --prefix=/home/kirkby/dependencies/
Thread model: posix
gcc version 4.4.0 (GCC)
****************************************************
Copying commentator patch
Solaris cblas
*************************************************
Using LINBOX_BLAS=-lcblas -latlas
*************************************************
checking for a BSD-compatible install... ./install-sh -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... nawk
checking whether make sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /usr/sfw/bin/ggrep
checking for egrep... /usr/sfw/bin/ggrep -E
checking for ANSI C header files... yes
checking build system type... sparc-sun-solaris2.10
checking host system type... sparc-sun-solaris2.10
checking for a sed that does not truncate output...
/home/kirkby/dependencies/bin/sed
checking for ld used by gcc... ld
checking if the linker (ld) is GNU ld... yes
checking for ld option to reload object files... -r
checking for BSD-compatible nm... /home/kirkby/bin/nm -B
checking whether ln -s works... yes
checking how to recognize dependent libraries... pass_all
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking how to run the C++ preprocessor... g++ -E
checking for g77... no
checking for xlf... no
checking for f77... f77
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether f77 accepts -g... yes
checking the maximum length of command line arguments... 786240
checking command to parse /home/kirkby/bin/nm -B output from gcc object...
ok
checking for objdir... .libs
checking for ar... ar
checking for ranlib... ranlib
checking for strip... strip
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC
checking if gcc PIC flag -fPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking whether the gcc linker (ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... yes
checking dynamic linker characteristics... solaris2.10 ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
configure: creating libtool
appending configuration tag "CXX" to libtool
checking for ld used by g++... ld
checking if the linker (ld) is GNU ld... yes
checking whether the g++ linker (ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC
checking if g++ PIC flag -fPIC works... yes
checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes
checking whether the g++ linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... solaris2.10 ld.so
(cached) (cached) checking how to hardcode library paths into programs...
immediate
appending configuration tag "F77" to libtool
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for f77 option to produce PIC... -fPIC
checking if f77 PIC flag -fPIC works... yes
checking if f77 static flag -static works... no
checking if f77 supports -c -o file.o... yes
checking whether the f77 linker (ld) supports shared libraries... yes
checking dynamic linker characteristics... solaris2.10 ld.so
(cached) (cached) checking how to hardcode library paths into programs...
immediate
checking for char... yes
checking size of char... 1
checking for short... yes
checking size of short... 2
checking for int... yes
checking size of int... 4
checking for long... yes
checking size of long... 4
checking for long long... yes
checking size of long long... 8
checking for __int64... no
checking size of __int64... 0
checking whether byte ordering is bigendian... yes
Default path = /usr /usr/local
checking whether to compile the drivers... no
checking for GMP >= 3.1.1... found
checking whether GMP is 4.0 or greater... yes
checking whether GMP was compiled with --enable-cxx... yes
checking for NTL >= 5.0... found
checking for GIVARO >= 3.2.10... found
checking whether to compile the sage interface... yes
checking for C interface to BLAS... not found
checking for others BLAS... not found
*******************************************************************************
ERROR: BLAS not found!
BLAS routines are required for this library to compile. Please
make sure BLAS are installed and specify its location with the option
--with-blas=<lib> when running configure.
*******************************************************************************
Error configuring linbox
real 0m53.809s
user 0m20.064s
sys 0m21.375s
sage: An error occurred while installing linbox-1.1.6
Please email sage-devel http://groups.google.com/group/sage-devel
explaining the problem and send the relevant part of
of /home/kirkby/sage-4.0.1.alpha0/install.log. Describe your computer,
operating system, etc.
If you want to try to fix the problem, yourself *don't* just cd to
/home/kirkby/sage-4.0.1.alpha0/spkg/build/linbox-1.1.6 and type 'make'.
Instead type "/home/kirkby/sage-4.0.1.alpha0/sage -sh"
in order to set all environment variables correctly, then cd to
/home/kirkby/sage-4.0.1.alpha0/spkg/build/linbox-1.1.6
(When you are done debugging, you can type "exit" to leave the
subshell.)
make[1]: *** [installed/linbox-1.1.6] Error 1
make[1]: Leaving directory `/home/kirkby/sage-4.0.1.alpha0/spkg'
real 497m40.205s
user 443m47.011s
sys 25m30.557s
python: can't open file
'/home/kirkby/sage-4.0.1.alpha0/devel/sage/doc/common/builder.py': [Errno
2] No such file or directory
}}}
--
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/6278>
Sage <http://sagemath.org/>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica,
and MATLAB
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