#18210: numerical bug in incomplete gamma function
-------------------------------------------------+-------------------------
Reporter: VivianePons | Owner:
Type: defect | Status: new
Priority: major | Milestone: sage-6.7
Component: symbolics | Resolution:
Keywords: sd67 | Merged in:
Authors: | Reviewers:
Report Upstream: Reported upstream. Developers | Work issues:
acknowledge bug. | Commit:
Branch: | Stopgaps:
Dependencies: |
-------------------------------------------------+-------------------------
Comment (by buck):
Procedure:
{{{#!sh
cd $PARI_ROOT
TAG=$(git describe)
git archive HEAD -o $TAG.tar.gz --prefix=$TAG/
mv pari-2.8-2230-g450ce38.tar.gz $SAGE_ROOT/upstream/
cd $SAGE_ROOT
./sage --fix-pkg-checksums
./sage -i -f -c pari
}}}
Changes to sage: (I had to touch up one of the patches to get it to
apply.)
{{{#!diff
diff --git a/build/pkgs/pari/checksums.ini b/build/pkgs/pari/checksums.ini
index c62c530..aabe08d 100644
--- a/build/pkgs/pari/checksums.ini
+++ b/build/pkgs/pari/checksums.ini
@@ -1,4 +1,4 @@
tarball=pari-VERSION.tar.gz
-sha1=fa23e0c8b6e38a356048d19224dc9b9658d77724
-md5=c753faaa4780de5ad8d461f0ffd70ecf
diff --git a/build/pkgs/pari/checksums.ini b/build/pkgs/pari/checksums.ini
index c62c530..aabe08d 100644
--- a/build/pkgs/pari/checksums.ini
+++ b/build/pkgs/pari/checksums.ini
@@ -1,4 +1,4 @@
tarball=pari-VERSION.tar.gz
-sha1=fa23e0c8b6e38a356048d19224dc9b9658d77724
-md5=c753faaa4780de5ad8d461f0ffd70ecf
-cksum=1220765312
+sha1=55299bfe042da491648897e830030083809d9967
+md5=97738f8e92bba498f7dfd723c8e9d910
+cksum=1221580104
diff --git a/build/pkgs/pari/package-version.txt b/build/pkgs/pari
/package-version.txt
index 2b25bd1..5fdd71e 100644
--- a/build/pkgs/pari/package-version.txt
+++ b/build/pkgs/pari/package-version.txt
@@ -1 +1 @@
-2.8-1813-g6157df4.p0
+2.8-2230-g450ce38
diff --git a/build/pkgs/pari/patches/public_memory_functions.patch
b/build/pkgs/pari/patches/public_memory_functions.patch
index b3726d7..ee14fa4 100644
--- a/build/pkgs/pari/patches/public_memory_functions.patch
+++ b/build/pkgs/pari/patches/public_memory_functions.patch
@@ -9,9 +9,9 @@ index 7067183..4ede6ed 100644
+void * pari_mainstack_malloc(size_t size);
+void pari_mainstack_mfree(void *s, size_t size);
+void pari_mainstack_free(struct pari_mainstack *st);
- void paristack_alloc(size_t rsize, size_t vsize);
void paristack_newrsize(ulong newsize);
void paristack_resize(ulong newsize);
+ void paristack_setsize(size_t rsize, size_t vsize);
diff --git a/src/language/init.c b/src/language/init.c
index 7b5922d..2a578d7 100644
--- a/src/language/init.c
}}}
I also had to install bison to get the build to run, which I hadn't
installed before, but I *had* built pari before (I think!) so I believe
that's a new build dependency there?
Result: `Successfully installed pari-2.8-2230-g450ce38; The PARI self-
tests all passed`
The sage console fails to start however, with `ImportError:
sage/local/lib/python2.7/site-packages/sage/libs/pari/gen.so: undefined
symbol: gp_algcenter`
--
Ticket URL: <http://trac.sagemath.org/ticket/18210#comment:31>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica,
and MATLAB
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