#4959: r's install_packages is broken in many variants of sage
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Reporter: was | Owner: mabshoff
Type: defect | Status: new
Priority: major | Milestone: sage-4.3.1
Component: packages | Keywords:
Work_issues: | Author:
Upstream: N/A | Reviewer:
Merged: |
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Comment(by kcrisman):
The behavior with the version `GCC_4.2.0' not found (required by
/usr/lib/libstdc++.so.6) continues to be the case on boxen.math after the
upgrade at #6532. On the plus side, it no longer refers to someone else's
installation.
Here is another interesting error which might help us - is it possible
that a number of R packages require non-universal libraries?
{{{* installing *source* package ‘rgl’ ...
checking for gcc... gcc -std=gnu99
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc -std=gnu99 accepts -g... yes
checking for gcc -std=gnu99 option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -std=gnu99 -E
checking for gcc... (cached) gcc -std=gnu99
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc -std=gnu99 accepts -g... (cached) yes
checking for gcc -std=gnu99 option to accept ISO C89... (cached) none
needed
checking for libpng-config... yes
configure: using libpng-config
configure: using libpng dynamic linkage
checking for X... libraries /usr/lib, headers /usr/include
checking GL/gl.h usability... no
checking GL/gl.h presence... no
checking for GL/gl.h... no
checking GL/glu.h usability... no
checking GL/glu.h presence... no
checking for GL/glu.h... no
configure: error: missing required header GL/gl.h
ERROR: configuration failed for package ‘rgl’
}}}
This was on boxen.math; on my own Mac I did not have any problems with
this package (a package installed by the package 'depth', which I needed
for some other computations). This tells me that
--
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/4959#comment:6>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica,
and MATLAB
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