#8329: Missing copy() method in BipartiteGraph
----------------------------+-----------------------------------------------
   Reporter:  rhinton       |       Owner:  rhinton             
       Type:  defect        |      Status:  needs_review        
   Priority:  major         |   Milestone:  sage-4.3.4          
  Component:  graph theory  |    Keywords:  BipartiteGraph, copy
     Author:  Ryan Hinton   |    Upstream:  N/A                 
   Reviewer:                |      Merged:                      
Work_issues:                |  
----------------------------+-----------------------------------------------

Comment(by rlm):

 This patch exposes a bug in another seldom used extension of the `Graph`
 class, `GraphBundle`.

 {{{
 File "/Users/rlmill/sage-4.3.3/devel/sage-
 main/sage/graphs/graph_bundle.py", line 163:
     sage: B.plot()
 Exception raised:
     Traceback (most recent call last):
       File "/Users/rlmill/sage-4.3.3/local/bin/ncadoctest.py", line 1231,
 in run_one_test
         self.run_one_example(test, example, filename, compileflags)
       File "/Users/rlmill/sage-4.3.3/local/bin/sagedoctest.py", line 38,
 in run_one_example
         OrigDocTestRunner.run_one_example(self, test, example, filename,
 compileflags)
       File "/Users/rlmill/sage-4.3.3/local/bin/ncadoctest.py", line 1172,
 in run_one_example
         compileflags, 1) in test.globs
       File "<doctest __main__.example_5[5]>", line 1, in <module>
         B.plot()###line 163:
     sage: B.plot()
       File "/Users/rlmill/sage-4.3.3/local/lib/python/site-
 packages/sage/graphs/graph_bundle.py", line 173, in plot
         total_pos = generic_graph_pyx.spring_layout_fast(self,
 iterations=iters)
       File "generic_graph_pyx.pyx", line 86, in
 sage.graphs.generic_graph_pyx.spring_layout_fast
 (sage/graphs/generic_graph_pyx.c:1361)
       File "/Users/rlmill/sage-4.3.3/local/lib/python/site-
 packages/sage/graphs/graph.py", line 2061, in to_undirected
         return copy(self)
       File "/Users/rlmill/sage-4.3.3/local/lib/python2.6/copy.py", line
 79, in copy
         return copier(x)
       File "/Users/rlmill/sage-4.3.3/local/lib/python/site-
 packages/sage/graphs/generic_graph.py", line 483, in __copy__
         G = self.__class__(self, name=self.name(), pos=copy(self._pos),
 boundary=copy(self._boundary), implementation=implementation,
 sparse=sparse)
       File "/Users/rlmill/sage-4.3.3/local/lib/python/site-
 packages/sage/graphs/graph_bundle.py", line 73, in __init__
         if isinstance(args[0], (list, tuple)):
     IndexError: tuple index out of range
 }}}

-- 
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/8329#comment:11>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica, 
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