#9808: Upgrade numpy to 1.5.0 and scipy to 0.8
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Reporter: maldun
| Owner: maldun
Type: task
| Status: needs_work
Priority: major
| Milestone: sage-4.6
Component: packages
| Keywords: numpy, scipy
Author: Stefan Reiterer, Francois Bissey, John Palmieri, David Kirkby
| Upstream: Fixed upstream, but not in a stable release.
Reviewer: Karl-Dieter Crisman, David Kirkby, Leif Leonhardy, Francois
Bissey | Merged:
Work_issues:
|
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Comment(by jhpalmieri):
I don't know the significance of this, but from the scipy-0.7.5.log (the
old version, which builds just fine):
{{{
copying scipy/weave/weave_version.py ->
build/lib.macosx-10.6-i386-2.6/scipy/weave
running build_clib
customize UnixCCompiler
customize UnixCCompiler using build_clib
customize Sage_FCompiler_1
i686-apple-darwin8-gfortran-4.2: no input files
i686-apple-darwin8-gfortran-4.2: no input files
i686-apple-darwin8-gfortran-4.2: unrecognized option '-shared'
i686-apple-darwin8-gfortran-4.2: no input files
i686-apple-darwin8-gfortran-4.2: unrecognized option '-shared'
i686-apple-darwin8-gfortran-4.2: no input files
customize Sage_FCompiler_1
i686-apple-darwin8-gfortran-4.2: no input files
i686-apple-darwin8-gfortran-4.2: no input files
i686-apple-darwin8-gfortran-4.2: unrecognized option '-shared'
i686-apple-darwin8-gfortran-4.2: no input files
i686-apple-darwin8-gfortran-4.2: unrecognized option '-shared'
i686-apple-darwin8-gfortran-4.2: no input files
customize Sage_FCompiler_1 using build_clib
building 'dfftpack' library
compiling Fortran sources
Fortran f77 compiler: sage_fortran -Wall -ffixed-form -fno-second-
underscore -fPIC -O3 -funroll-loops
Fortran f90 compiler: sage_fortran -Wall -fno-second-underscore -fPIC -O3
-funroll-loops
Fortran fix compiler: sage_fortran -Wall -ffixed-form -fno-second-
underscore -Wall -fno-second-underscore -fPIC -O3 -funroll-loops
}}}
From the failed scipy-0.8.log:
{{{
copying scipy/weave/weave_version.py ->
build/lib.macosx-10.6-i386-2.6/scipy/weave
running build_clib
customize UnixCCompiler
customize UnixCCompiler using build_clib
customize NAGFCompiler
Found executable
/Applications/sage_builds/numpy/sage-4.6.alpha2/local/bin/sage_fortran
Found executable /usr/bin/ar
Found executable /usr/bin/ranlib
customize AbsoftFCompiler
customize IBMFCompiler
Could not locate executable xlf95
customize IntelFCompiler
customize GnuFCompiler
gnu: no Fortran 90 compiler found
Found executable /usr/bin/ld
gnu: no Fortran 90 compiler found
customize Gnu95FCompiler
customize Gnu95FCompiler
customize Gnu95FCompiler using build_clib
building 'dfftpack' library
compiling Fortran sources
Fortran f77 compiler:
/Applications/sage_builds/numpy/sage-4.6.alpha2/local/bin/sage_fortran
-Wall -ffixed-form -fno-second-underscore -arch ppc -arch x86_64 -arch
ppc64 -fPIC -O3 -funroll-loops
Fortran f90 compiler:
/Applications/sage_builds/numpy/sage-4.6.alpha2/local/bin/sage_fortran
-Wall -fno-second-underscore -arch ppc -arch x86_64 -arch ppc64 -fPIC -O3
-funroll-loops
Fortran fix compiler:
/Applications/sage_builds/numpy/sage-4.6.alpha2/local/bin/sage_fortran
-Wall -ffixed-form -fno-second-underscore -Wall -fno-second-underscore
-arch ppc -arch x86_64 -arch ppc64 -fPIC -O3 -funroll-loops
}}}
Note that there are now lots of extra arguments to the fortran compiler.
--
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/9808#comment:247>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica,
and MATLAB
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