#10348: upgrade optional biopython package to 1.56
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   Reporter:  mhampton                       |       Owner:  tbd       
       Type:  enhancement                    |      Status:  needs_work
   Priority:  major                          |   Milestone:  sage-4.7  
  Component:  optional packages              |    Keywords:  biopython 
     Author:  Marshall Hampton               |    Upstream:  N/A       
   Reviewer:  Martin Albrecht, David Kirkby  |      Merged:            
Work_issues:                                 |  
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Comment(by awebb):

 Hi,

 I noticed that 1.57 has been released so I threw together a new package. I
 kept in mind a few of the comments here. I didn't switch around the order
 of the change log. This can be changed if this is thought to be important.

 I have one test failure in the internal test suite. However, I am running
 Ubuntu 11.04 beta 2 (AMD64) and this might be a system specific problem. I
 am also running a Sage built using 10.10 because of a building problem
 with 11.04. This is being discussed on the sage-devel list.

 http://news.open-bio.org/news/2011/04/biopython-1-57-released/

 New package at
 http://sage.math.washington.edu/home/awebb/biopython-1.57.spkg.

 Cheers,

 Adam

-- 
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/10348#comment:8>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica, 
and MATLAB

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