#11503: Make new spkg to install Jmol in SAGE_LOCAL/share
-------------------------------------------------+--------------------------
Reporter: gutow | Owner: gutow
Type: task | Status:
needs_review
Priority: major | Milestone: sage-5.0
Component: notebook | Keywords: sd31 Jmol
flask
Work_issues: jmol script chmod'd to executable | Upstream: N/A
Reviewer: Dan Drake, Jason Grout | Author: Jonathan
Gutow
Merged: | Dependencies: flask
notebook, #11078, #11874
-------------------------------------------------+--------------------------
Changes (by jason):
* status: needs_work => needs_review
Old description:
> In an effort to remove Jmol from the notebook in the Flask notebook it is
> being moved to SAGE_LOCAL/share. This is based on the logic that the
> notebook can run without Jmol, but Sage cannot run without either the
> notebook or Jmol even when using just the command line.
>
> To achieve this relocation of Jmol:
>
> 1. install the '''spkg'''
> [http://boxen.math.washington.edu/home/jdemeyer/spkg/jmol-12.0.45.p3.spkg]
>
> 2. '''Apply''' [attachment:trac-11503-jmol-spkg.patch] to the '''sage
> root''' repository.
>
> 3. '''Apply''' [attachment:trac-11503-jmol-commandline.patch] to the sage
> repository (fixes jmol on the command line)
>
> The necessary patch for sagenb has already been merged with the master
> sagenb branch: https://github.com/sagemath/sagenb/pull/28
New description:
In an effort to remove Jmol from the notebook in the Flask notebook it is
being moved to SAGE_LOCAL/share. This is based on the logic that the
notebook can run without Jmol, but Sage cannot run without either the
notebook or Jmol even when using just the command line.
To achieve this relocation of Jmol:
1. install the '''spkg'''
[http://sage.math.washington.edu/home/jason/jmol/jmol-12.0.45.p4.spkg]
2. '''Apply''' [attachment:trac-11503-jmol-spkg.patch] to the '''sage
root''' repository.
3. '''Apply''' [attachment:trac-11503-jmol-commandline.patch] to the sage
repository (fixes jmol on the command line)
The necessary patch for sagenb has already been merged with the master
sagenb branch: https://github.com/sagemath/sagenb/pull/28
--
Comment:
I just uploaded a p4 version that sets the jmol script to executable after
copying to local/bin. So it's needs review again.
--
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/11503#comment:44>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica,
and MATLAB
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