#12011: Build ATLAS on OS X Lion
--------------------------+-------------------------------------------------
Reporter: jhpalmieri | Owner: tbd
Type: defect | Status: needs_info
Priority: blocker | Milestone: sage-5.0
Component: packages | Keywords: Lion Darwin cvxopt atlas blas
Work_issues: | Upstream: Reported upstream. Little or no
feedback.
Reviewer: | Author:
Merged: | Dependencies:
--------------------------+-------------------------------------------------
Comment(by dimpase):
doesnt work on OSX10.6:
{{{
Calling sage-spkg on
'http://boxen.math.washington.edu/home/jdemeyer/spkg/atlas-3.8.4.p2.spkg'
atlas-3.8.4.p2
Machine:
Darwin nash 10.8.0 Darwin Kernel Version 10.8.0: Tue Jun 7 16:33:36 PDT
2011; root:xnu-1504.15.3~1/RELEASE_I386 i386
Deleting directories from past builds of previous/current versions of
atlas-3.8.4.p2
/usr/local/src/sage/sage-4.8.alpha4/local/bin/sage-spkg: file
atlas-3.8.4.p2 does not exist
Attempting to download it.
http://boxen.math.washington.edu/home/jdemeyer/spkg/atlas-3.8.4.p2.spkg
--> atlas-3.8.4.p2.spkg
[..................................................]
Extracting package
/usr/local/src/sage/sage-4.8.alpha4/spkg/optional/atlas-3.8.4.p2.spkg ...
-rw-r--r-- 1 dima staff 2866339 Mar 6 19:27
/usr/local/src/sage/sage-4.8.alpha4/spkg/optional/atlas-3.8.4.p2.spkg
Finished extraction
****************************************************
Host system
uname -a:
Darwin nash 10.8.0 Darwin Kernel Version 10.8.0: Tue Jun 7 16:33:36 PDT
2011; root:xnu-1504.15.3~1/RELEASE_I386 i386
****************************************************
****************************************************
CC Version
gcc -v
Using built-in specs.
Target: i686-apple-darwin10
Configured with: /var/tmp/gcc/gcc-5666.3~6/src/configure --disable-
checking --enable-werror --prefix=/usr --mandir=/share/man --enable-
languages=c,objc,c++,obj-c++ --program-transform-
name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-
darwin10 --program-prefix=i686-apple-darwin10- --host=x86_64-apple-
darwin10 --target=i686-apple-darwin10 --with-gxx-include-
dir=/include/c++/4.2.1
Thread model: posix
gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
****************************************************
Traceback (most recent call last):
File "./spkg-install", line 13, in <module>
from configuration import conf, cp, try_run, edit_in_place
File
"/usr/local/src/sage/sage-4.8.alpha4/spkg/build/atlas-3.8.4.p2/configuration.py",
line 108, in <module>
conf['release'] = subprocess.check_output(['uname', '-r'])
AttributeError: 'module' object has no attribute 'check_output'
real 0m0.092s
user 0m0.038s
sys 0m0.044s
************************************************************************
Error installing package atlas-3.8.4.p2
************************************************************************
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the relevant part of the log file
/usr/local/src/sage/sage-4.8.alpha4/spkg/logs/atlas-3.8.4.p2.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, *don't* just cd to
/usr/local/src/sage/sage-4.8.alpha4/spkg/build/atlas-3.8.4.p2 and type
'make' or whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
(cd '/usr/local/src/sage/sage-4.8.alpha4/spkg/build/atlas-3.8.4.p2' &&
'/usr/local/src/sage/sage-4.8.alpha4/sage' -sh)
When you are done debugging, you can type "exit" to leave the subshell.
************************************************************************
Error: Failed to install package 'atlas-3.8.4.p2'.
nash:sage-5.0.beta6 dima$
}}}
--
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/12011#comment:12>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica,
and MATLAB
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