We use samba3+openldap 2.1 correctly. net groupmapping also works correctly.
Are your samba.schema is up to date? What is the ldap version?
In my case i use OpenLDAP 2.1.23, with Samba 3.0.0 schemas. 'net groupmapping' works fine except you don't have default mappings when using an ldap backend as first backend,
i.e.:
with "passwd backend = tdbsam ldapsam_compat://..."
Samba 3 schema and ldapsam_compat ?? Are you sure that your directory is used by Samba ?
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