Dear SAMTools,
I'm trying to 'make' the source I downloaded from your website so I can use the
tools to do some sequencing but I always get the following error at the end of
the 'make' routine:
make[1]: Leaving directory '/home/bob/samtools/htslib-1.0'
gcc -pthread -o samtools bam_index.o bam_plcmd.o sam_view.o bam_cat.o bam_md.o
bam_reheader.o bam_sort.o bedidx.o kprobaln.o
bam_rmdup.o bam_rmdupse.o bam_mate
.o bam_stat.o
bam_color.o bamtk.o kaln.o bam2bcf.o bam2bcf_indel.o errmod.o samp
le.o cut_target.o phase.o bam2depth.o padding.o bedcov.o
bamshuf.o faidx.o stats
.o stats_isize.o
bam_flags.o bam_split.o bam_tview.o bam_tview_curses.o bam_tvie
w_html.o
bam_lpileup.o libbam.a htslib-1.0/libhts.a -lcurses -lm -lz
errmod.o: In function `cal_coef':
/home/bob/samtools/errmod.c:85: undefined reference to `expl'
/home/bob/samtools/errmod.c:85:(.text+0xbfc): relocation truncated to fit:
R_X86
_64_PC32 against undefined symbol `expl'
/home/bob/samtools/errmod.c:86: undefined reference to `logl'
/home/bob/samtools/errmod.c:86:(.text+0xc1d): relocation truncated to fit:
R_X86
_64_PC32 against undefined symbol `logl'
collect2: error: ld returned 1 exit status
Makefile:124: recipe for target 'samtools' failed
make: *** [samtools] Error 1
I am using cygwin64 on Windows 8.0.
Thanks
Paul------------------------------------------------------------------------------
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