Hello,
Could someone comment on the below question. Any suggestions are
valuable.sasaaa
-------- Forwarded Message --------
Subject: [Samtools-help] N in ALT column
Date: Tue, 28 Oct 2014 15:19:56 +0200
From: mehar <meharji.arumi...@helsinki.fi>
To: samtools-help@lists.sourceforge.net
<samtools-help@lists.sourceforge.net>
Hi,
I have performed variant calling with samtools for canine genome. For
some reason some of the variants have N in ALT column as shown below:
chr21 29989187 . A AN 96.50 60 0 46 46 1
Could someone help to understand what it means?
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