Hello,
I realized that samtools cat doesn't work if only one input file is
supplied. Is this behavior intentional? I would prefer if one input file
was allowed, just like in Unix cat. Example:
## Two files, OK:
samtools cat test.bam test.bam | samtools view -c -
352
## One file:
samtools cat test.bam
Usage: samtools cat [-h header.sam] [-o out.bam] <in1.bam> <in2.bam> [...]
samtools --version
samtools 1.1
Using htslib 1.1
Copyright (C) 2014 Genome Research Ltd.
Thanks!
Dario
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