Hello
I noticed that samtools is not managing exit code for its programs the same
way
A proof example is given in this code
http://coderscrowd.com/app/codes/view/288
where we have 'samtools sort' and 'samtools view' given files that do not
exist, both should return an exit code of 1
sort => exit code 0
view => exit code 1
Any thoughts ?
--
*Radhouane Aniba*
*Bioinformatics Scientist*
*BC Cancer Agency, Vancouver, Canada*
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