On 23 Feb 2016, at 21:00, William Hsiao <wwhs...@icloud.com> wrote:
> Thank you so much for solving the problem for me.  I definitely learned 
> something.  I’m trying to figure out where did you see the /usr/lib64/ 
> specified.  I was trying to look for a second copy of libz.so that might 
> cause a conflict but couldn’t find it and didn’t realize that it is in 
> /usr/lib64.

You mentioned the names of the zlib packages installed, so "rpm -ql zlib-devel" 
lists everything the dev package installs and thus shows where it has installed 
libraries.  Without the name of the package, I would have found it out via "rpm 
-qf /usr/include/zlib.h".

Also I happen to know what Red Hat's conventions are :-).

Alternatively, adding -Wl,-Map,foo.map to the link command should produce a 
useful dump of exactly which libraries got pulled in, etc.

Cheers,

    John

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