On 23 Feb 2016, at 21:00, William Hsiao <wwhs...@icloud.com> wrote: > Thank you so much for solving the problem for me. I definitely learned > something. I’m trying to figure out where did you see the /usr/lib64/ > specified. I was trying to look for a second copy of libz.so that might > cause a conflict but couldn’t find it and didn’t realize that it is in > /usr/lib64.
You mentioned the names of the zlib packages installed, so "rpm -ql zlib-devel" lists everything the dev package installs and thus shows where it has installed libraries. Without the name of the package, I would have found it out via "rpm -qf /usr/include/zlib.h". Also I happen to know what Red Hat's conventions are :-). Alternatively, adding -Wl,-Map,foo.map to the link command should produce a useful dump of exactly which libraries got pulled in, etc. Cheers, John -- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE. ------------------------------------------------------------------------------ Site24x7 APM Insight: Get Deep Visibility into Application Performance APM + Mobile APM + RUM: Monitor 3 App instances at just $35/Month Monitor end-to-end web transactions and take corrective actions now Troubleshoot faster and improve end-user experience. Signup Now! http://pubads.g.doubleclick.net/gampad/clk?id=272487151&iu=/4140 _______________________________________________ Samtools-help mailing list Samtools-help@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/samtools-help