Hi,
I get a segfault when I run 'bcftools stats'. Not sure if it's a bug or
incorrect input data. This is with bcftools 1.3.1 with htslib 1.3.1
The command is:
bcftools stats --fasta-ref /usr/local/share/genomes/human_g1k_v37.fasta
KI006.anno.vcf.gz
I get the backtrace below:
Program received signal SIGSEGV, Segmentation fault.
#0 0x00000000004109cc in do_indel_stats (reader=0x742a40, reader=0x742a40,
stats=0x711010, args=0x711010) at vcfstats.c:625
#1 do_vcf_stats (args=0x711010) at vcfstats.c:1067
#2 main_vcfstats (argc=<optimized out>, argv=<optimized out>)
at vcfstats.c:1583
#3 0x00007ffff7103b15 in __libc_start_main () from /lib64/libc.so.6
#4 0x000000000040ce81 in _start ()
Any idea how to track down the problem is welcome.
Thanks,
Peter
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