Hi,
Just a quick query. Where does samtools write the temporary files for the
collate step? Can I assume /tmp or the location defined by $TMPDIR?
Thanks,
Keiran Raine, M.Sc., MBCS
Principal Software Developer
Cancer, Ageing and Somatic Mutation
Wellcome Sanger Institute
k...@sanger.ac.uk<mailto:k...@sanger.ac.uk>
Office: D3-19
Ext: 4983
Please note that due to childcare requirements during the Covid lockdown I am
generally not available after 4pm.
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The Wellcome Sanger Institute is operated by Genome Research
Limited, a charity registered in England with number 1021457 and a
company registered in England with number 2742969, whose registered
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