Hi all,
I was hoping that someone could point me in the right direction for processing
WGS data for phylogenetics and population genetics. I will soon have 10x whole
genome data for about 27 individuals of a lizard species. I will need to go
from raw reads to multiple sequence alignments and SNPs/genotypes. There is a
reference genome available from a closely related species. Any guidance would
be appreciated.
Chris
<{===================~~~~~~~~~~~
/\ /\
Christopher Blair, Ph.D.
Executive Officer, Biology PhD Program
Professor
Graduate Center and
New York City College of Technology
The City University of New York
cbl...@citytech.cuny.edu<mailto:cbl...@gc.cuny.edu>;
cbl...@gc.cuny.edu<mailto:cbl...@gc.cuny.edu>
Website: https://sites.google.com/site/christopherblairphd/home
Office: 4315 (GC); Academic Complex 501D (City Tech)
Lab: Academic Complex 401 (City Tech)
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