Scientific Linux 5.1 x86_64 is now officially released and available. The DVD iso image is being tested before being uploaded, but should be up in the iso area soon.

http://ftp.scientificlinux.org/linux/scientific/51/iso/x86_64/
ftp://ftp.scientificlinux.org/linux/scientific/51/iso/x86_64/

CD images are still being built.

-Connie Sieh
-Troy Dawson






Scientific Linux "SL 5.1" for x86_64             January 16, 2008

Items marked with a "*" indicate changes since 5.0

See SL.documentation for Upstream vendor release notes.

Send comments/issues/test reports to [EMAIL PROTECTED]

--------------------------------------------------------------------------
Table of contents

        DOWNLOAD INFO
        ADDED compared to Enterprise 5
        UPDATED compared to Enterprise 5
           Installer/legal modifications
        /contrib
        SRPMS
        HARDWARE REQUIREMENTS
        LIMITATIONS
        INFO
        ERRATA
        RPMS that have not built yet
_____________________________________________________________________________
DOWNLOAD INFO
_____________________________________________________________________________

        ftp://ftp.scientificlinux.org/linux/scientific/5rolling/x86_64/

-------------------------------------------------------------------------
ADDED compared to vendor
-------------------------------------------------------------------------
*915resolution
*       
*       915resolution is a tool to modify the video BIOS of the 800 and 900 
*       series  Intel graphics chipsets. This includes the 845G, 855G, and 
*       865G chipsets, as well as 915G, 915GM, and 945G chipsets. This 
*       modification is necessary to allow the display of certain graphics
*       resolutions for an Xorg or XFree86 graphics server.
*       915resolution's modifications of the BIOS are transient. There is 
*       no risk of permanent modification of the BIOS. This also means that 
*       915resolution must be run every time the computer boots inorder for 
*       it's changes to take effect.
*       
*       915resolution is derived from the tool 855resolution. However, the i
*       code differs substantially. 915resolution's code base is much simpler.i
*       915resolution also allows the modification of bits per pixel.
*
*       915resolution-0.5.3-6.el5.x86_64.rpm

*alpine
*
*       Alpine is a tool for reading, sending, and managing electronic messages.
*       Alpine is the successor to Pine and was developed by Computing & 
*       Communications at the University of Washington.
*
*       alpine-1.00-1.x86_64.rpm

cfitsio
 
        CFITSIO is a library of C and FORTRAN subroutines for reading 
        and writing data files in FITS (Flexible Image Transport System) i
        data format. CFITSIO is widely used in the astronomical community.
 
        cfitsio-3.030-1.sl5.x86_64.rpm
        cfitsio-devel-3.030-1.sl5.x86_64.rpm
 

dropit
        dropit's intended purpose is to remove directories entries from  a
        PATH shell variable value, which has colon separated fields.  
        dropit is usable in sh, ksh, and csh shell script files.
    
                        dropit-1.2-1.x86_64.rpm

FUSE
        
        With FUSE it is possible to implement a fully functional filesystem 
        in a userspace program.
        fuse-smb: you can seamlessly browse your network neighbourhood as if 
        it were on your own filesystem. Only when you're accessing a share is
        a connection made to the remote computer.  This also allows users to 
        mount smb shares using kerberos.
        fuse-sshfs: A FUSE-filesystem client based on the 
        SSH File Transfer Protocol.  On the client side mounting the 
        filesystem is as easy as logging into the server with ssh.
 
*       fuse-2.6.3-1.SL.x86_64.rpm
*       fuse-devel-2.6.3-1.SL.x86_64.rpm
*       fuse-libs-2.6.3-1.SL.x86_64.rpm
*       fuse-smb-0.8.5-1.x86_64.rpm
*       fuse-sshfs-1.7-2.SL.x86_64.rpm
*       kernel-module-fuse-2.6.18-53.1.4.el5-2.6.3-1.el5.x86_64.rpm
*       kernel-module-fuse-2.6.18-53.1.4.el5xen-2.6.3-1.el5.x86_64.rpm

Graphviz

        Graph Visualization Tools
        
        graphviz-2.8-1.sl.x86_64.rpm
        graphviz-devel-2.8-1.sl.x86_64.rpm
        graphviz-doc-2.8-1.sl.x86_64.rpm
        graphviz-graphs-2.8-1.sl.x86_64.rpm
        graphviz-guile-2.8-1.sl.x86_64.rpm
        graphviz-java-2.8-1.sl.x86_64.rpm
        graphviz-lua-2.8-1.sl.x86_64.rpm
        graphviz-ocaml-2.8-1.sl.x86_64.rpm
        graphviz-perl-2.8-1.sl.x86_64.rpm
        graphviz-php-2.8-1.sl.x86_64.rpm
        graphviz-python-2.8-1.sl.x86_64.rpm
        graphviz-ruby-2.8-1.sl.x86_64.rpm
        graphviz-tcl-2.8-1.sl.x86_64.rpm
        

icewm
 
        A lightweight window manager for the X Window System.
        
*       icewm-1.2.33-1.x86_64.rpm
*       icewm-l10n-1.2.33-1.x86_64.rpm

Intel wireless firmware
 
        Firmware for the IntelĀ® PRO/Wireless 2100 and 2200 Driver.
        Please read the license that comes in the rpm carefully.
        ipw2200-firmware-3.0 includes version 2.2, 2.3, 2.4, and 3.0
 
        ipw2100-firmware-1.3-5.noarch.rpm
        ipw2200-firmware-3.0-1.noarch.rpm

        ipw3945d is needed to control the ipw3945 wireless card
        kernel-module-ipw3945 is needed because this driver is not in 
        the standard kernel.  Note that the installer does NOT know
        how to enable the 3945 wireless.   You will have to add the
        starting of the /sbin/ipw3945d in your startup scripts.
        This driver is known to work on the Dell 820 and Dell 620.  
        It is known to NOT work on the FJS S7110 (Fujitsu).
 
*               ipw3945-1.2.0-2.sl5.x86_64.rpm
                ipw3945d-1.7.22-7.sl5.x86_64.rpm
*               ipw3945-firmware-1.14.2-1.sl5.noarch.rpm
*               kernel-module-ipw3945-2.6.18-53.1.4.el5-1.2.0-2.el5.x86_64.rpm
*               
kernel-module-ipw3945-2.6.18-53.1.4.el5xen-1.2.0-2.el5.x86_64.rpm

*       The file iwlwifi-4965.ucode is required to be
*       present on your system in order for the Intel Wireless WiFi Link
*       4965AGN driver for Linux (iwlwifi) to be able to operate on your
*       system.
* 
*               iwlwifi-4965-ucode-4.44.17-5.sl5.noarch.rpm

JAVA 
  
*       java-1.5.0-sun-compat-1.5.0.14-1jpp.noarch.rpm
*       jdk-1.5.0_14-fcs.i586.rpm
*       jdk-1.5.0_14-fcs.x86_64.rpm
  
        This packages is the java sdk from sun.
        It's license is found at SL.documentation/jdk-1.5.x.license
        To have all of it's links (including plugins) setup correctly you should
        also install java-1.5.0-sun-compat
        So the easiest thing to do is  
              yum install java-1.5.0-sun-compat
        as it will automatically pull in the current j2sdk-1.5.0 rpm.
  
    java-1.5.0-sun-compat-1.5.0.11-1jpp.noarch.rpm
     
        This package provides JPackage compatibility symlinks and 
        directories for Sun's JDK rpm.

madwifi
 
        Support for Atheros G wireless
        madfifi is the Multiband Atheros Driver for WiFi, a linux device driver
        for 802.11a/b/g universal NIC cards - either Cardbus, PCI or MiniPCI - 
        that use Atheros chipsets (ar5210, ar5211, ar5212).
 
*       madwifi-0.9.3.3-12.sl5.x86_64.rpm
*       kernel-module-madwifi-2.6.18-53.1.4.el5-0.9.3.3-12.el5.x86_64.rpm
*       kernel-module-madwifi-2.6.18-53.1.4.el5xen-0.9.3.3-12.el5.x86_64.rpm
*       kernel-module-madwifi-hal-2.6.18-53.1.4.el5-0.9.3.3-12.el5.x86_64.rpm
*       kernel-module-madwifi-hal-2.6.18-53.1.4.el5xen-0.9.3.3-12.el5.x86_64.rpm

Multimedia

        gstreamer-plugins-extras-0.10.9-2.sl.x86_64.rpm from SL4 
        k3b-extras-0.12.17-3.sl.x86_64.rpm      from livna Repository
        
These are dependencies of the above rpms.

        lame-3.97-1.sl.x86_64.rpm               from RPMforge
        lame-devel-3.97-1.sl.x86_64.rpm         from RPMforge
        libid3tag-0.15.1b-3.sl.x86_64.rpm       from RPMforge
        libid3tag-devel-0.15.1b-3.sl.x86_64.rpm from RPMforge
        libmad-0.15.1b-4.sl.x86_64.rpm          from RPMforge
        libmad-devel-0.15.1b-4.sl.x86_64.rpm    from RPMforge
        taglib-1.4-1.2.sl.x86_64.rpm            from RPMforge
        taglib-devel-1.4-1.2.sl.x86_64.rpm      from RPMforge

ndiswrapper
  
    The ndiswrapper project makes it possible to use WLAN-Hardware
    with Linux by means of a loadable kernel module that "wraps
    around" NDIS (Windows network driver API) drivers.  These rpms contain
    just the kernel module and loader. You will also need the Windows driver
    for your card.
 
        ndiswrapper-1.41-1.SL.x86_64.rpm
*       kernel-module-ndiswrapper-2.6.18-53.1.4.el5-1.41-1.SL.x86_64.rpm
*       kernel-module-ndiswrapper-2.6.18-53.1.4.el5xen-1.41-1.SL.x86_64.rpm

nedit
    NEdit is a GUI text editor for the X Window System and Motif.
    
        nedit-5.5-10.x86_64.rpm

*NumPy
*  
*       http://numpy.scipy.org//
*       NumPy derives from the old Numeric code base and can be used as a 
*       replacement for Numeric.  It also adds the features introduced by 
*       Numarray and can also be used to replace Numarray.
*  
*       This package contains:
*          - a powerful N-dimensional array object
*          - sophisticated (broadcasting) functions
*          - basic linear algebra functions
*          - basic Fourier transforms
*          - sophisticated random number capabilities
*          - tools for integrating Fortran code.
*  
*       numpy-1.0.4-1.x86_64.rpm

OpenAFS

*       We have put in the latest 1.4.6 release of openafs
 
*               openafs-1.4.6-58.SL5.x86_64.rpm
*               openafs-authlibs-1.4.6-58.SL5.x86_64.rpm
*               openafs-authlibs-devel-1.4.6-58.SL5.x86_64.rpm
*               openafs-client-1.4.6-58.SL5.x86_64.rpm
*               openafs-compat-1.4.6-58.SL5.x86_64.rpm
*               openafs-debug-1.4.6-58.SL5.x86_64.rpm
*               openafs-devel-1.4.6-58.SL5.x86_64.rpm
*               openafs-firstboot-1.4-1.SL.noarch.rpm
*               openafs-kernel-source-1.4.6-58.SL5.x86_64.rpm
*               openafs-kpasswd-1.4.6-58.SL5.x86_64.rpm
*               openafs-krb5-1.4.6-58.SL5.x86_64.rpm
*               openafs-server-1.4.6-58.SL5.x86_64.rpm
                openafs-firstboot-1.4-1.SL.noarch.rpm
*               kernel-module-openafs-2.6.18-53.1.4.el5-1.4.6-58.SL5.x86_64.rpm
*               
kernel-module-openafs-2.6.18-53.1.4.el5xen-1.4.6-58.SL5.x86_64.rpm


 
These perl modules have been added as they are useful.  They came from SL4
   
        perl-MailTools-1.62-1.noarch.rpm
        perl-Parse-RecDescent-1.94-1.noarch.rpm
        perl-SQL-Statement-1.06-1.noarch.rpm
        perl-TermReadKey-2.20-12.x86_64.rpm
        perl-Text-CSV_XS-0.23-1.x86_64.rpm
        perl-Text-Template-1.44-1.noarch.rpm
        perl-Tk-804.027-1.x86_64.rpm
*       perl-TimeDate has been added to the release by The Upstream Vendor
*       We decided to use TUV's version of perl-TimeDate
 

R

        http://www.r-project.org/
        R is a language and environment for statistical computing and graphics. 
        It is a GNU project which is similar to the S language and environment 
        which was developed at Bell Laboratories by John Chambers and 
        colleagues. 
        R can be considered as a different implementation of S. There are some 
        important differences, but much code written for S runs unaltered 
        under R.

*       R-2.5.0-2.sl5x.x86_64.rpm
*       R-devel-2.5.0-2.sl5x.x86_64.rpm
*       libRmath-2.5.0-2.sl5x.x86_64.rpm
*       libRmath-devel-2.5.0-2.sl5x.x86_64.rpm

r1000
    
      This is the Linux device driver released for RealTek Ethernet controllers,
      which are listed as following.
            1. RTL8169S/SB/SC (Gigabit Ethernet with PCI interface)
            2. RTL8168B (Gigabit Ethernet with PCI-Express interface)
            3. RTL8101E (Fast Ethernet with PCI-Express interface)
    
        r1000-1.05-1.sl.x86_64.rpm
*       kernel-module-r1000-2.6.18-53.el5-1.05-1.sl.x86_64.rpm
*       kernel-module-r1000-2.6.18-53.el5xen-1.05-1.sl.x86_64.rpm

 
SL_afs_no_dynroot-2.0-2.noarch.rpm
 
        This package removes the -dynroot option from the openafs config
        Restarting of afs is needed for this to take effect.
        This rpm does not restart afs
  
SL_desktop_tweaks-5-4.noarch.rpm

        This adds a terminal icon to the kicker panel for both KDE and GNOME.
        This also changed the KDE startup background from red to black
        Installed by default for both KDE and GNOME.
  
SL_enable_serialconsole-3.1-6.noarch.rpm
   
        This script makes all the changes necessary to send
        console output to both the serial port and the screen.  This
        also creates a login prompt on the serial port and allows users 
        to login at this prompt. 
    
SL_no_colorls-1.0-3.noarch.rpm
 
        Turns off "color" of ls.  Not installed by default.

SL_password_for_singleuser-1.0-1.noarch.rpm
  
        Changes /etc/inittab to require the root password for
        single user mode.  Not installed by default.
        This used to be SL_inittab_change

SL_rpm_show_arch-1.0-2.noarch.rpm
 
        Adds arch to "rpm -qa" listing.
 
SL_sendmail_accept-1.1-3.noarch.rpm
  
        Changes Sendmail config so that it allows incomming mail.
        Not installed by default.

*tidy
*       When editing HTML it's easy to make mistakes. Wouldn't it be nice if
*       there was a simple way to fix these mistakes automatically and tidy up
*       sloppy editing into nicely layed out markup? Well now there is! Dave
*       Raggett's HTML TIDY is a free utility for doing just that. It also
*       works great on the atrociously hard to read markup generated by
*       specialized HTML editors and conversion tools, and can help you
*       identify where you need to pay further attention on making your pages
*       more accessible to people with disabilities.
* 
*       tidy-0.99.0-12.20070228.sl5.x86_64.rpm
*       libtidy-0.99.0-12.20070228.sl5.x86_64.rpm
*       libtidy-devel-0.99.0-12.20070228.sl5.x86_64.rpm

Yumex
  
        Yumex is a graphical user interface for yum.
   
*               yumex-2.0.2-1.0.el5.noarch.rpm

yum-utils
        
        yum-utils is a collection of utilities and examples for the yum 
        package manager. It includes utilities by different authors that
        make yum easier and more powerful to use.  Some utilities are
        plugin's.
                
                yum-utils-1.0.4-1.el5.noarch.rpm
                yum-allowdowngrade-1.0.4-1.el5.noarch.rpm
                yum-changelog-1.0.4-1.el5.noarch.rpm
                yum-downloadonly-1.0.4-1.el5.noarch.rpm
                yum-fastestmirror-1.0.4-1.el5.noarch.rpm
                yum-fedorakmod-1.0.4-1.el5.noarch.rpm
*               yum-installonlyn-1.0.4-2.sl5.noarch.rpm
                yum-priorities-1.0.4-1.el5.noarch.rpm
                yum-protectbase-1.0.4-1.el5.noarch.rpm
                yum-skip-broken-1.0.4-1.el5.noarch.rpm
                yum-tsflags-1.0.4-1.el5.noarch.rpm
                yum-updateonboot-1.0.4-1.el5.noarch.rpm
                yum-versionlock-1.0.4-1.el5.noarch.rpm


MISC
        Added these rpms because they are important but upstream vendor did
        not include them.
   
                gv-3.6.2-2.sl5.x86_64.rpm               from Stephan Wiesand
                pine-4.64-3.sl.x86_64.rpm               from Dag's Repository

------------------------------------------------------------------------
Changed RPMS compared to vendor
-------------------------------------------------------------------------
Installer(anaconda)
 
        Modified pkgorder with patches from CentOS
        Modified installclasses/rhel.py to remove key request
        Modified installclasses/rhel.py to include SL groups
*       sites support
*       see sites/example
*
*       Note: Installing sites on a virtual machine  
*       When installing a paravirtulized site, you have to point at the
*       site directory, such as 5rolling/i386/sites/example
*
*       When installing a fully virtulized site, you only have to point
*       to the base directory, like you usually would, such as
*       5rolling/x86_64/sites/example

There are minimal changes compared to the "vendor" release.  We have changed
the "rpms" that are required to be changed.  These changes are defined by the 
"vendor".

        redhat-artwork-5.0.9-1.SL.2.x86_64.rpm
        redhat-artwork-5.0.9-1.SL.2.i386.rpm
        redhat-logos-4.9.16-1.SL.6.noarch.rpm
*       sl-release-5.1-1.x86_64.rpm
*       sl-release-notes-5.1-1.noarch.rpm
                sl-release changes the default mozilla and firefox bookmarks.
                sl-release changes the default rhn configuration to use yum and
                  points this configuration to ftp.scientificlinux.org
                sl-release removed the firstboot additional cd's question
                redhat-logos was changed to add the "photographs" shown during
                  the install
 
These rpm's are not required to be changed by the vendor, but we felt 
they needed to be changed
 
        gdm-2.16.0-30.sl5.x86_64.rpm
                Changed the default theme from RHEL to EaseOfBlue
        pirut-1.2.10-1.sl.noarch.rpm
                Removed "Requires: rhn-setup-gnome"
        rhgb-0.16.4-8.sl.1.x86_64.rpm
                Changed the colors.

*python-virtinst
*
*       virtinst is a module to help in starting installations inside of 
*       virtual machines.  It supports both paravirt guests as well as 
*       fully virtualized guests.  It uses libvirt (http://www.libvirt.org)i
*       for starting things.  Also contained is a simple 
*       script virt-install which uses virtinst in a command line mode.
*       
*       It was only configured to know about TUV virtual machines.  We added
*       a patch so that it knew about Scientific Linux, and thus be able 
*       to install SL paravirtual machines.     
*
*       python-virtinst-0.103.0-3.sl5.2.noarch.rpm

yum
 
        Yum version 2.4 and above has the kernel-module plugin that let's yum
        understand how kernel-module rpm's are related to kernels.  Because of
        this updates dealing with kernel-module rpm's (such as afs) now work
 
        yum-conf
        metadata_expire variable was set to 20 hours to allow for normal users
        to be able to use yum for those commands they can run
        yum-conf has the following repositories in it
          sl-base (enabled)
          sl-security (enabled)
          sl-testing (not enabled)
          sl-fastbugs (not enabled)
          sl-bugfix-51 (not enabled)
          atrpms (not enabled)
          dag (not enabled)
          flash (not enabled)
        Not all repositories are enabled by default.  
        To enable them for one time use, use the --enablerepo command, such as
          yum --enablerepo=atrpms list mplayer
          yum --enablerepo=dag install xine
          yum --enablerepo=flash install flash-player
  
        If you want the repositories to be enabled all the time then you need
        to edit the config files and change enabled=0 to enabled=1.
        The config files are in the /etc/yum.repos.d/ directory and are 
        named like
          /etc/yum.repos.d/atrpms.repo
          /etc/yum.repos.d/dag.repo
        
        NOTE1: Just because a yum repository exists does NOT mean
        it is compatible with all other yum repositories.  We have included 
        the repositories we did because they usually work well together.  But if
        there is a problem with one of the packages in a repository, 
        please contact that repository maintainer.
  
        yum-autoupdate

        yum-autoupdate has the check for a running yum in it, so that if 
        yum has been running for a long time (close to 24 hours), when the 
        yum.cron starts up, it will kill the old yum.  This was changed 
        because we had reports that yum was hanging and we didn't want 
        this to interfere with updates.
  
        yum-autoupdate checks to see how long the machine is been up
        If it is up less than 20 hours, it doesn't wait, but does the update.
        If it is longer than 20 hours, it waits a random time, up to 3 hours.
        This uptime check was done to help laptops and other machines that
        might not be on long enough to wait for the random time.
        The random time was put it in so that servers arn't overwhelmed.
   
        yum-conf-5x was created for those users who want to be at the latest
        stable release.  It is always pointing at the 5x area.  This means
        that when we make new versions you will automatically be upgraded to
        them.
    
 
                yum-3.0.6-2.sl.noarch.rpm
                yum-autoupdate-1-1.SL.noarch.rpm
*               yum-conf-51-1.SL.noarch.rpm
                yum-conf-5x-3-1.SL.noarch.rpm
                yum-rhn-plugin-0.4.3-1.el5.noarch.rpm
*               yum-metadata-parser-1.0.4-1.sl5.x86_64.rpm
                yum-updatesd-3.0.6-2.sl.noarch.rpm


Apache
*       Changed index.html to not have Upstream Vendor info but to
        have SL info.
 
*       httpd-2.2.3-11.sl5.3.x86_64.rpm  
*       httpd-devel-2.2.3-11.sl5.3.x86_64.rpm
*       httpd-devel-2.2.3-11.sl5.3.i386.rpm
*       httpd-manual-2.2.3-11.sl5.3.x86_64.rpm
*       mod_ssl-2.2.3-11.sl5.3.x86_64.rpm

Changed in order to be built
 
        Some rpm's had to be changed in order for us to build them.
        
        The following rpm's had to have a variable changed so that they
        point to the current include file
 
        brlapi-0.4.1-1.fc6.1.i386.rpm
        brlapi-0.4.1-1.fc6.1.x86_64.rpm
        brlapi-devel-0.4.1-1.fc6.1.i386.rpm
        brlapi-devel-0.4.1-1.fc6.1.x86_64.rpm
        brltty-3.7.2-1.fc6.1.x86_64.rpm


-----------------------------------------------------------------------------
/SL/
-----------------------------------------------------------------------------
 The location of the rpms.
-----------------------------------------------------------------------------
 /contrib/
------------------------------------------------------------------------------
RPMS provided by colaboraters that either cannot go in main release or are
intesting before going into main release.

See the SRPMS section for source rpms

-----------------------------------------------------------------------------
/updates/
-----------------------------------------------------------------------------
       security
                Security errata
       fastbugs
                Packages rebuilt from the Upstream Vendor Fastrack rpms
                These are rpms that are expected to be in the next Update
                They have gone through full QA by the Upstream Vendor
       bugfix52
                Reserved for packages from the next Update. 

---------------------------------------------------------------------------
/../SRPMS/
---------------------------------------------------------------------------

/SL/
      Contains the SRPMS for what we added or changed.  Put these in the
        top level directory as these are really the ones we changed.  All
        the others can be obtained from the upstream vendor ftp updates area
/vendor/
        The upstream vendors SRPMS.
        This directory contains both the original released SRPMS, as well as
        the updated SRPMS
/contrib/
        SRPMS for the contrib packages
/sites/<site>/SRPMS
        SRPMS for sites, if there is a site

---------------------------------------------------------------------------
/../archive/
---------------------------------------------------------------------------
/obsolete/x86_64/
                Packages that used to be in the release but have been   
                updated
/debuginfo/x86_64/
                Debuginfo packages

-----------------------------------------------------------------------------
LIMITATIONS
-----------------------------------------------------------------------------
ipw2100, ipw2200, ipw3945
        Does not work in the installer

ftp install
        Currently, during an ftp install when it get's the the graphical 
        section, there is a long pause (close to a minute) when it sits 
        at a blank screen.  It is NOT frozen,  it is just searching for 
        files that are not there.  Give it a couple minutes and it
        will continue. 

-----------------------------------------------------------------------------
INFO
-----------------------------------------------------------------------------
Web Site

  https://www.scientificlinux.org

FTP

  ftp://ftp.scientificlinux.org/linux/scientific/5rolling/

Mailing Lists

  [EMAIL PROTECTED]     Development of Scientific Linux
  [EMAIL PROTECTED]     Users of Scientific Linux supporting
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ERRATA rebuilt from SRPMS
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