On 05/06/2011 07:44 AM, Emilio Xavier Esposito wrote:
Hi Thank you! The yum command fixed the problem. I also edited the
/etc/yum.repos.d/sl-updates.repo file as suggested but the
/etc/yum.repos.d/sl-fastbugs.repo file was not present.
The sl-fastbugs repo section is in the /etc/yum.repos.d/sl-updates.repo
file. There is no /etc/yum.repos.d/sl-fastbugs.repo file.
> Should I
perform the following to insure that everything is current?
yum clean all
yum update
yum check all
It should help.
I have also noticed that some packages (pdb2pka; part of the pdb2pqr
package http://www.poissonboltzmann.org/pdb2pqr/ ) cannot find
portions of numpy (also installed) during compiling.
I'll have to let someone else answer this one. I am not a numpy expert.
As this workstation is relatively fresh, I am open to doing a fresh
install and trying various solutions.
Emilio
On Fri, May 6, 2011 at 3:47 AM, Troy Dawson<[email protected]> wrote:
Hi, We are seeing this problem more and more. The problem stems
from when you did the install, you probrubly picked the sl-fastbugs
repo during the install. This means that you got all the security
and fastbug updates during the install, which is good, in a way.
The real problem is that sl-fastbugs isn't turned on by default.
So you have all these packages that were updated during the
install, but now when yum looks at the enabled repositories, it
only see's packages that are older than you have installed.
Short term solution yum --enablerepo=sl-fastbugs install
libSM.i686
Longer term solution Edit /etc/yum.repos.d/sl-updates.repo and edit
sl-fastbugs and change "enable=0" to "enable=1"
Longer term solution This is a problem we need to address before SL
6.1. I have some ideas, but wouldn't mind suggestions.
Troy
On 05/05/2011 09:33 PM, Emilio Xavier Esposito wrote:
Hi Thomas Thank you for the suggestion. Attempting to install
the libSM.i686 library via yum returns:
Transaction Check Error: package libuuid-2.17.2-6.el6_0.1.x86_64
(which is newer than libuuid-2.17.2-6.el6.i686) is already
installed
I think something might be really off regarding the workstation
as it cannot find numpy even though it is installed (according to
yum).
Emilio
On Thu, May 5, 2011 at 4:43 PM, tom P<[email protected]> wrote:
Am 05.05.2011 20:58, schrieb Emilio Xavier Esposito:
Hi I recently did a fresh install of SL6 x86_64 (formerly
running SL5.3 x86_64) and realized that the 32 bit libraries
were not installed. SL6 is up-to-date and I have installed
the NVIDIA drivers from NVIDIA.
One application returns the following when trying to run the
gui version but the command line version works as expected.
libSM.so.6: cannot open shared object file: No such file or
directory
I have looked in the "Add/Remove Software" application for
the "32 bit libraries" package but could not find them. I
have also tried to install the 32 bit (i686) version of the
libraries using rpm. The rpm command and resulting error
are:
[root@SL6box ~]# rpm -i
ftp://ftp.scientificlinux.org/linux/scientific/6x/x86_64/os/Packages/libSM-1.1.0-7.1.el6.i686.rpm
error: Failed dependencies:
libuuid.so.1 is needed by libSM-1.1.0-7.1.el6.i686
libuuid.so.1(UUID_1.0) is needed by libSM-1.1.0-7.1.el6.i686
[root@SL6box ~]# rpm -i
ftp://ftp.scientificlinux.org/linux/scientific/6x/x86_64/os/Packages/libuuid-2.17.2-6.el6.i686.rpm
package libuuid-2.17.2-6.el6_0.1.x86_64 (which is newer than
libuuid-2.17.2-6.el6.i686) is already installed
I have also tried to include the i686 repo under yum but have
received the same results.
Is there another way of installing the 32 bit libraries? As
the missing libraries are most likely graphics related, is
there a subset of libraries I should install? Or should I
install SL 5.5 or Fedora?
Thank you Emilio
Have you tried installing the package directly via yum: 'yum
install libSM.i686'. Worked here on a 64bit SL6 system without
fiddling with the repos. We rely heavily on 32bit libs and I
usually don't need to grab them manually.
Best regards, Thomas
-- __________________________________________________ Troy Dawson
[email protected] (630)840-6468 Fermilab
ComputingDivision/SCF/FEF/SLSMS Group
__________________________________________________
--
__________________________________________________
Troy Dawson [email protected] (630)840-6468
Fermilab ComputingDivision/SCF/FEF/SLSMS Group
__________________________________________________
