On Thu, Jul 13, 2017, at 04:21, Martin Fleck wrote:
> Indeed, this could be the complete problem already! For the analysis I use a 
> binary image - so only one bit per pixel.
FWIW, binary images are stored as ubyte, so 1 *byte* per pixel.

>  Greg: Regarding your PR and my analysis: My analysis using a 1.2GB file 
> stops due to memory problems already in 
> skimage.morphology.remove_small_objects() even if the major memory blowup 
> happens with skimage.morphology.label().>  So there are problems at multiple 
> steps that hopefully can be improved.
Thanks for helping us uncover and trace these!

Stéfan

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