On Sun, Jan 22, 2012 at 3:34 PM, Andreas <[email protected]> wrote:
> Hi everybody.
> While reviewing the label propagation PR, I thought about the pairwise
> rbf functions.
> Would it be possible to compute an sparse, approximate RBF kernel matrix
> using ball trees?
> The idea would be that if the distance between two points is some
> "large" multiple of gamma, the kernel can be assumed
> to be zero.
> Do you think this is feasible to implement and helpful for real data?

I don't know how you would implement it but I think this would be interesting.

rbf in scipy is running into memory problems if the number of
observations is too large. I tried a version once that used scipy
kdtree to build a sparse distance/kernel matrix.

Josef

>
> Cheers,
> Andy
>
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