Hi David,
One simple suggestion: Did you build numpy, then scipy, and then
scikit-learn using their respective make/setup.py?
Virgile
On Mon, Sep 17, 2012 at 5:31 PM, David Montgomery <[email protected]
> wrote:
> Hi,
>
> I upgraded numpy to 1.6 and sci to .12 and now I get the below. I am
> on ubuntu 10.04 How do I resolve?
>
> Thanks
>
> ''
> from sklearn import linear_model
> Traceback (most recent call last):
> File "<stdin>", line 1, in <module>
> File "/usr/local/lib/python2.6/dist-packages/sklearn/__init__.py",
> line 32, in <module>
> from .base import clone
> File "/usr/local/lib/python2.6/dist-packages/sklearn/base.py", line
> 10, in <module>
> from .metrics import r2_score
> File
> "/usr/local/lib/python2.6/dist-packages/sklearn/metrics/__init__.py",
> line 13, in <module>
> from . import cluster
> File
> "/usr/local/lib/python2.6/dist-packages/sklearn/metrics/cluster/__init__.py",
> line 19, in <module>
> from .unsupervised import silhouette_samples
> File
> "/usr/local/lib/python2.6/dist-packages/sklearn/metrics/cluster/unsupervised.py",
> line 10, in <module>
> from ..pairwise import pairwise_distances
> File
> "/usr/local/lib/python2.6/dist-packages/sklearn/metrics/pairwise.py",
> line 38, in <module>
> from scipy.spatial import distance
> File "/usr/lib/python2.6/dist-packages/scipy/spatial/__init__.py",
> line 7, in <module>
> from ckdtree import *
> File "numpy.pxd", line 30, in scipy.spatial.ckdtree
> (scipy/spatial/ckdtree.c:6087)
> ValueError: numpy.dtype does not appear to be the correct type object
>
>
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