Hello Andy,
the best paper that contains the pseudo-algo description and also references to 
the original one is this one:
"Automatic Analysis of Malware Behaviour using Machine Learning"
Page 9, Section 2.3.1 and Page 10, 2.3.2
The code implementation is in C and is available as part of the Malheur code 
base which I am familiar with.
It shouldn't be that hard to implement in Python, so let me know.
I am quite happy to attempt an implementation.

Regards.
________________________________________
From: Andy [[email protected]]
Sent: 07 November 2013 06:06
To: [email protected]
Subject: Re: [Scikit-learn-general] Prototype Extraction algorithm      
implementation

Hi Paolo.
Could you please give a link to the reference paper? I couldn't find it.
Could you maybe also give a quick description of the algorithm, I'm
afraid I'm not familiar with it (by that name).

Thanks,
Andy

On 11/06/2013 07:05 AM, Paolo Di Prodi wrote:
> Hello there,
> I am a new user of Scikit and I was wondering if somebody had or is willing 
> to implement the prototype extraction algorithm (Gonzales 1985) which is a 
> linear time
> algorithm very useful for incremental data set clustering.
> In case this algorithm is not implemented should I go ahead and do a similar 
> implementation to sklearn.cluster.KMeans ?
> The idea is then to use clustering using the extracted prototypes using 
> complete linkage which I think is implemented already?
>
> Regards.
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