Hi Sarah,

t-SNE does not support incremental training. Your model will be retrained every time you fit a new batch of data (see https://github.com/scikit-learn/scikit-learn/blob/master/sklearn/manifold/t_sne.py#L664). That means you might have found a dataset that reveals an error in implementation. Could you provide a small script that reproduces the error?

Best regards,

Alexander

Am 18.04.2016 um 14:28 schrieb leg...@web.de:
Hey everyone!
I am new to Python and the scikit learn package so I hope someone can help me with the two issues I encountered during use of the sklearn.manifold implementation of the t-SNE algorithm. First a little bit of context: I am repeatedly feeding batches of dimensionality 500x784 to the algorithm for visualization. However, before my script finishes, one of the two following error messages occurs:
AssertionError:[t-SNE]Insertionfailed
or
AssertionError:Treeconsistency failed:unexpected number of points=499at root node=500 Furthermore, these messages do not occur at a fixed time but their behaviour seems rather non-deterministic. Hopefully someone came across this problem before and can help me to fix it.
Best,
Sarah


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