[PyMOL] Verify PDB format

2012-06-27 Thread Martin Hediger
Dear PyMOL users
Does anybody know a script to verify that a file contains valid a valid 
PDB formatted structure?
The file extension alone obviously does not provide sufficient validation.

Thanks for any feedback.
Martin

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Re: [PyMOL] Verify PDB format

2012-06-27 Thread Joel Tyndall
Hi Martin,

I might be missing something but a little more information might help as to 
what you want to do. agreed, a file extension can be changed to anything but 
viewing the text file should tell you the type (of coordinate file). If you are 
doing this in batch mode then I guess a script would help!

Joel

-Original Message-
From: Martin Hediger [mailto:ma@bluewin.ch] 
Sent: Wednesday, 27 June 2012 10:01 p.m.
To: pymol-users@lists.sourceforge.net
Subject: [PyMOL] Verify PDB format

Dear PyMOL users
Does anybody know a script to verify that a file contains valid a valid PDB 
formatted structure?
The file extension alone obviously does not provide sufficient validation.

Thanks for any feedback.
Martin

--
Live Security Virtual Conference
Exclusive live event will cover all the ways today's security and threat 
landscape has changed and how IT managers can respond. Discussions will include 
endpoint security, mobile security and the latest in malware threats. 
http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
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Live Security Virtual Conference
Exclusive live event will cover all the ways today's security and 
threat landscape has changed and how IT managers can respond. Discussions 
will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
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