[Rd] PR#7718

2005-03-07 Thread znmeb
R-devel 2005/03/07 is totally innocent. Uninstalling Atlas 3.6.0 fixed 
this. You can close it out; once I figure out whether it's Gentoo's 
packaging of Atlas or Atlas/Athlon itself, I'll post a bug on whichever 
it turns out to be.

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RE: [Rd] Does cat("\a") ring a bell?

2005-03-07 Thread John Fox
Dear Duncan et al.,

Actually, it doesn't work under ESS on Windows either.

Regards,
 John


John Fox
Department of Sociology
McMaster University
Hamilton, Ontario
Canada L8S 4M4
905-525-9140x23604
http://socserv.mcmaster.ca/jfox 
 

> -Original Message-
> From: [EMAIL PROTECTED] 
> [mailto:[EMAIL PROTECTED] On Behalf Of 
> [EMAIL PROTECTED]
> Sent: Monday, March 07, 2005 3:18 PM
> To: stefano iacus
> Cc: Duncan Murdoch; r-devel@stat.math.ethz.ch
> Subject: Re: [Rd] Does cat("\a") ring a bell?
> 
> > On Mon, 7 Mar 2005 21:12:17 +0100, stefano iacus (si) wrote:
> 
>   > no, on Mac OS X, but could be easily implemented.
>   > stefano
> 
>   > On 07/mar/05, at 21:02, Duncan Murdoch wrote:
> 
>   >> Under GUIs other than Windows (Mac OS X, ESS, etc.) does
>   >>
>   >> cat("\a")
>   >>
>   >> still make a bell (or some other) sound?  If so, I'll 
> add a "bell()"
>   >> function to utils.
>   >> 
> 
> On Linux:
> 
> xterm/gnome-terminal: yes
> ESS   no
> 
> .f
> 
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Re: [Rd] Does cat("\a") ring a bell?

2005-03-07 Thread Friedrich . Leisch
> On Mon, 7 Mar 2005 21:12:17 +0100,
> stefano iacus (si) wrote:

  > no, on Mac OS X, but could be easily implemented.
  > stefano

  > On 07/mar/05, at 21:02, Duncan Murdoch wrote:

  >> Under GUIs other than Windows (Mac OS X, ESS, etc.) does
  >> 
  >> cat("\a")
  >> 
  >> still make a bell (or some other) sound?  If so, I'll add a "bell()"
  >> function to utils.
  >> 

On Linux:

xterm/gnome-terminal:   yes
ESS no

.f

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RE: [Rd] Does cat("\a") ring a bell?

2005-03-07 Thread Vadim Ogranovich
Not under ESS/Emacs/Linux :

> cat("\a")
^G> 

> -Original Message-
> From: [EMAIL PROTECTED] 
> [mailto:[EMAIL PROTECTED] On Behalf Of Duncan Murdoch
> Sent: Monday, March 07, 2005 12:02 PM
> To: r-devel@stat.math.ethz.ch
> Subject: [Rd] Does cat("\a") ring a bell?
> 
> Under GUIs other than Windows (Mac OS X, ESS, etc.) does 
> 
>  cat("\a") 
> 
> still make a bell (or some other) sound?  If so, I'll add a "bell()"
> function to utils.
> 
> Duncan Murdoch
> 
> __
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>

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Re: [Rd] Does cat("\a") ring a bell?

2005-03-07 Thread stefano iacus
no, on Mac OS X, but could be easily implemented.
stefano
On 07/mar/05, at 21:02, Duncan Murdoch wrote:
Under GUIs other than Windows (Mac OS X, ESS, etc.) does
 cat("\a")
still make a bell (or some other) sound?  If so, I'll add a "bell()"
function to utils.
Duncan Murdoch
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[Rd] Does cat("\a") ring a bell?

2005-03-07 Thread Duncan Murdoch
Under GUIs other than Windows (Mac OS X, ESS, etc.) does 

 cat("\a") 

still make a bell (or some other) sound?  If so, I'll add a "bell()"
function to utils.

Duncan Murdoch

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[Rd] Dear Friend. (PR#7720)

2005-03-07 Thread sshari11
Dear Friend.

As you read this, I don't want you to feel sorry for me, because, I believe
everyone will die someday.

My name is Shadak Shari, a merchant in Dubai, in the U.A.E.I have been
diagnosed with Esophageal cancer .It has defiled all forms of medical
treatment, and right now I have only about a few months to live, according
to medical experts.

I have not particularly lived my life so well, as I never really cared for
anyone(not even myself)but my business. Though I am very rich, I was never
generous, I was always hostile to people and only focused on my business as
that was the only thing I cared for. But now I regret all this as I now know
that there is more to life than just wanting to have or make all the money
in the world.

I believe when God gives me a second chance to come to this world I would
live my life a different way from how I have lived it. Now that God has
called me, I have willed and given most of my property and assets to my
immediate and extended family members as well as a few close friends.

I want God to be merciful to me and accept my soul so, I have decided to
give alms to charity organizations, as I want this to be one of the last
good deeds I do on earth. So far, I have distributed money to some charity
organizations in the U.A.E, Algeria and Malaysia. Now that my health has
deteriorated so badly, I cannot do this myself anymore.

I once asked members of my family to close one of my accounts and distribute
the money which I have there to charity organization in Bulgaria and
Pakistan, they refused and kept the money to themselves. Hence, I do not
trust them anymore, as they seem not to be contended with what I have left
for them.

The last of my money which no one knows of is the huge cash deposit of seven
million dollars $7,000,000,that I have with a 
finance/Security Company abroad. I will want you to help me collect this
deposit and dispatched it to charity organizations.

I have set aside 10% for you for your time and patience.please send a reply
through this email address([EMAIL PROTECTED]) with your full contact
information for more private and confidential 
communication.

God be with you.

Shadak Shari


-- 
DSL Komplett von GMX +++ Supergünstig und stressfrei einsteigen!
AKTION "Kein Einrichtungspreis" nutzen: http://www.gmx.net/de/go/dsl

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Re: [Rd] R crashes using the em function of package mclust (PR#7719)

2005-03-07 Thread becker
Duncan Murdoch schrieb:

>On Mon,  7 Mar 2005 09:35:39 +0100 (CET), [EMAIL PROTECTED] wrote
>:
>
>  
>
>>Hi,
>>
>>I got the same problem like
>>http://tolstoy.newcastle.edu.au/R/devel/04/11/1204.html
>>
>>R crashes when I use the em function from the mclust package on 
>>univariate data and on a special case on bivariate data (when the matrix 
>>is not provided as written in the manual).
>>It seems as if the problem is the format of the data to be analyzed.
>>
>>Operating System: Windows XP (SP2)
>>R version: R-2.0.1
>>
>>The following example causes a crash of R:
>>
>># univariate example
>>require(mclust)
>>X <- c(rnorm(100, mean=1), rnorm(100, mean=5))
>># I also tried: X <- as.matrix(c(rnorm(100, mean=1), rnorm(100, mean=5)))
>>Xmap <- cbind(c(rep(1, 100), rep(0, 100)), c(rep(0, 100), rep(1, 100)))
>>Xm <- mstep(modelName="V", data=X, z=Xmap)
>># CRASH:
>>em(modelName=Xm$modelName, data=X, mu=Xm$mu, sigmasq=Xm$sigmasq, pro=Xm$pro)
>>
>>
>
>Which version of mclust?  I just installed  2.1-8  and ran your code
>in R-2.0.1 with no problem.
>
>  
>
I used 2.1-6. As you say 2.1-8 runs with no problem.
Sorry, my fault.

>In any case, this looks more like an mclust problem than an R problem;
>if you're using the current version, you should follow up with the
>maintainer,   Ron Wehrens <[EMAIL PROTECTED]>.
>
>Duncan Murdoch
>
>  
>

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Re: [Rd] R crashes using the em function of package mclust (PR#7719)

2005-03-07 Thread murdoch
On Mon,  7 Mar 2005 09:35:39 +0100 (CET), [EMAIL PROTECTED] wrote
:

>Hi,
>
>I got the same problem like
>http://tolstoy.newcastle.edu.au/R/devel/04/11/1204.html
>
>R crashes when I use the em function from the mclust package on 
>univariate data and on a special case on bivariate data (when the matrix 
>is not provided as written in the manual).
>It seems as if the problem is the format of the data to be analyzed.
>
>Operating System: Windows XP (SP2)
>R version: R-2.0.1
>
>The following example causes a crash of R:
>
># univariate example
>require(mclust)
>X <- c(rnorm(100, mean=1), rnorm(100, mean=5))
># I also tried: X <- as.matrix(c(rnorm(100, mean=1), rnorm(100, mean=5)))
>Xmap <- cbind(c(rep(1, 100), rep(0, 100)), c(rep(0, 100), rep(1, 100)))
>Xm <- mstep(modelName="V", data=X, z=Xmap)
># CRASH:
>em(modelName=Xm$modelName, data=X, mu=Xm$mu, sigmasq=Xm$sigmasq, pro=Xm$pro)

Which version of mclust?  I just installed  2.1-8  and ran your code
in R-2.0.1 with no problem.

In any case, this looks more like an mclust problem than an R problem;
if you're using the current version, you should follow up with the
maintainer,   Ron Wehrens <[EMAIL PROTECTED]>.

Duncan Murdoch

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Re: [Rd] R crashes using the em function of package mclust (PR#7719)

2005-03-07 Thread Brian D Ripley
Please read the FAQ and report this in the correct place:

   Bug reports on contributed packages should be sent first to the package
maintainer, and only submitted to the R-bugs repository by package
maintainers, mentioning the package in the subject line.

You are not the named maintainer.


On Mon, 7 Mar 2005 [EMAIL PROTECTED] wrote:

> Hi,
>
> I got the same problem like
> http://tolstoy.newcastle.edu.au/R/devel/04/11/1204.html
>
> R crashes when I use the em function from the mclust package on
> univariate data and on a special case on bivariate data (when the matrix
> is not provided as written in the manual).
> It seems as if the problem is the format of the data to be analyzed.
>
> Operating System: Windows XP (SP2)
> R version: R-2.0.1
>
> The following example causes a crash of R:
>
> # univariate example
> require(mclust)
> X <- c(rnorm(100, mean=1), rnorm(100, mean=5))
> # I also tried: X <- as.matrix(c(rnorm(100, mean=1), rnorm(100, mean=5)))
> Xmap <- cbind(c(rep(1, 100), rep(0, 100)), c(rep(0, 100), rep(1, 100)))
> Xm <- mstep(modelName="V", data=X, z=Xmap)
> # CRASH:
> em(modelName=Xm$modelName, data=X, mu=Xm$mu, sigmasq=Xm$sigmasq, pro=Xm$pro)
>
> For bivariate data the following example works:
>
> # bivariate example
> require(mclust)
> Y <- as.matrix(cbind(c(rnorm(100, mean=1), rnorm(100, mean=5)),
> c(rnorm(100, mean=1), rnorm(100, mean=5
> Ymap <- cbind(c(rep(1, 100), rep(0, 100)), c(rep(0, 100), rep(1, 100)))
> Ym <- mstep(modelName="EEE", data=Y, z=Ymap)
> # NO CRASH:
> em(modelName=Ym$modelName, data=Y, mu=Ym$mu, sigmasq=Ym$Sigma, pro=Ym$pro)
>
> But when the variables are not columns (as written in the mclust manual)
> but rows, R crashes again:
>
> # CRASH:
> em(modelName=Ym$modelName, data=t(Y), mu=Ym$mu, sigmasq=Ym$Sigma,
> pro=Ym$pro)
>
> Perhaps this is a hint to the origin of the problem.
> I could not use the em function for univariate data successfully yet.
> Perhaps anyone can provide a working example for univariate data?
>
> Thanks in advance.
>
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>

-- 
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University of Oxford, Tel:  +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UKFax:  +44 1865 272595

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[Rd] R crashes using the em function of package mclust (PR#7719)

2005-03-07 Thread becker
Hi,

I got the same problem like
http://tolstoy.newcastle.edu.au/R/devel/04/11/1204.html

R crashes when I use the em function from the mclust package on 
univariate data and on a special case on bivariate data (when the matrix 
is not provided as written in the manual).
It seems as if the problem is the format of the data to be analyzed.

Operating System: Windows XP (SP2)
R version: R-2.0.1

The following example causes a crash of R:

# univariate example
require(mclust)
X <- c(rnorm(100, mean=1), rnorm(100, mean=5))
# I also tried: X <- as.matrix(c(rnorm(100, mean=1), rnorm(100, mean=5)))
Xmap <- cbind(c(rep(1, 100), rep(0, 100)), c(rep(0, 100), rep(1, 100)))
Xm <- mstep(modelName="V", data=X, z=Xmap)
# CRASH:
em(modelName=Xm$modelName, data=X, mu=Xm$mu, sigmasq=Xm$sigmasq, pro=Xm$pro)

For bivariate data the following example works:

# bivariate example
require(mclust)
Y <- as.matrix(cbind(c(rnorm(100, mean=1), rnorm(100, mean=5)), 
c(rnorm(100, mean=1), rnorm(100, mean=5
Ymap <- cbind(c(rep(1, 100), rep(0, 100)), c(rep(0, 100), rep(1, 100)))
Ym <- mstep(modelName="EEE", data=Y, z=Ymap)
# NO CRASH:
em(modelName=Ym$modelName, data=Y, mu=Ym$mu, sigmasq=Ym$Sigma, pro=Ym$pro)

But when the variables are not columns (as written in the mclust manual) 
but rows, R crashes again:

# CRASH:
em(modelName=Ym$modelName, data=t(Y), mu=Ym$mu, sigmasq=Ym$Sigma, 
pro=Ym$pro)

Perhaps this is a hint to the origin of the problem.
I could not use the em function for univariate data successfully yet.
Perhaps anyone can provide a working example for univariate data?

Thanks in advance.

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Re: [Rd] "make check-all" fails on R-devel 2005/03/07 (PR#7718)

2005-03-07 Thread Prof Brian Ripley
What platform is this?: `Gentoo Linux' is too vague.  Please investigate 
the failure and follow-up with the details (there should be a 
tests/nafns.Rout.fail file).

NB: we are not seeing a problem on FC3 Linux under i686 or x86_64 or under 
Windows or Solaris.

On Mon, 7 Mar 2005 [EMAIL PROTECTED] wrote:
Full_Name: Ed Borasky
Version: R-devel 2005/03/07
OS: Gentoo Linux
Submission from: (NULL) (24.21.54.168)
How to reproduce:
1. Download R-devel.tar.bz2 (the one I have is 2005/03/07)


2. Unpack it
3. Type
  ./configure --prefix=/opt 2>&1 | tee configure.log
  make 2>&1 | tee make.log
  make check-all 2>&1 | tee make-check-all.log
running tests of LAPACK-based functions
make[3]: Entering directory `/home/znmeb/R-devel/tests'
running code in 'lapack.R' ... OK
make[3]: Leaving directory `/home/znmeb/R-devel/tests'
make[2]: Leaving directory `/home/znmeb/R-devel/tests'
make[2]: Entering directory `/home/znmeb/R-devel/tests'
running tests of NA handling functions
make[3]: Entering directory `/home/znmeb/R-devel/tests'
running code in 'nafns.R' ...make[3]: *** [nafns.Rout] Error 1
make[3]: Leaving directory `/home/znmeb/R-devel/tests'
make[2]: *** [test-Nafns] Error 2
make[2]: Leaving directory `/home/znmeb/R-devel/tests'
make[1]: *** [test-all-devel] Error 1
make[1]: Leaving directory `/home/znmeb/R-devel/tests'
make: *** [check-all] Error 2
bash-2.05b$
I have the complete logs if you want them. This same sequence worked fine with
R-patched dated 2005/03/07. The system is Gentoo Linux (gcc-3.3.5,
glibc-2.3.4.20040808-r1, 2.6.10-gentoo-r7 i686)
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Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel:  +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UKFax:  +44 1865 272595
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[Rd] "make check-all" fails on R-devel 2005/03/07 (PR#7718)

2005-03-07 Thread znmeb
Full_Name: Ed Borasky
Version: R-devel 2005/03/07
OS: Gentoo Linux
Submission from: (NULL) (24.21.54.168)


How to reproduce:

1. Download R-devel.tar.bz2 (the one I have is 2005/03/07)
2. Unpack it
3. Type

   ./configure --prefix=/opt 2>&1 | tee configure.log
   make 2>&1 | tee make.log
   make check-all 2>&1 | tee make-check-all.log

running tests of LAPACK-based functions
make[3]: Entering directory `/home/znmeb/R-devel/tests'
running code in 'lapack.R' ... OK
make[3]: Leaving directory `/home/znmeb/R-devel/tests'
make[2]: Leaving directory `/home/znmeb/R-devel/tests'
make[2]: Entering directory `/home/znmeb/R-devel/tests'
running tests of NA handling functions
make[3]: Entering directory `/home/znmeb/R-devel/tests'
running code in 'nafns.R' ...make[3]: *** [nafns.Rout] Error 1
make[3]: Leaving directory `/home/znmeb/R-devel/tests'
make[2]: *** [test-Nafns] Error 2
make[2]: Leaving directory `/home/znmeb/R-devel/tests'
make[1]: *** [test-all-devel] Error 1
make[1]: Leaving directory `/home/znmeb/R-devel/tests'
make: *** [check-all] Error 2
bash-2.05b$  

I have the complete logs if you want them. This same sequence worked fine with
R-patched dated 2005/03/07. The system is Gentoo Linux (gcc-3.3.5,
glibc-2.3.4.20040808-r1, 2.6.10-gentoo-r7 i686)

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