Re: [sage-release] Re: Sage 8.3.beta0 released

[Emmanuel Charpentier]

As already asked to François :

Isn't Trac#25323  good
enough ?

--
Emmanuel Charpentier
Vox clamans in deserto...

Le jeu. 10 mai 2018 à 19:35, Jeroen Demeyer  a écrit :

> On 2018-05-09 22:21, Volker Braun wrote:
> > Open one on trac if there is not one already.
>
> +1
>
> A ticket on Trac is much more visible than a mailing list post.
>
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Re: [sage-release] Re: Sage 8.3.beta0 released

[Jeroen Demeyer]

On 2018-05-09 22:21, Volker Braun wrote:

Open one on trac if there is not one already.


+1

A ticket on Trac is much more visible than a mailing list post.

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Re: [sage-release] Re: Sage 8.3.beta0 released

[Vincent Delecroix]

If it is, it is not the only one, see

https://trac.sagemath.org/ticket/25332

Vincent

On 10/05/2018 10:21, François Bissey wrote:

It is probably an oversight or a corner case in 
https://trac.sagemath.org/ticket/20382
Do open a ticket for that.

François


On 10/05/2018, at 20:15, Emmanuel Charpentier  
wrote:

On Debian testing running on cote i7 + 16 GB RAM, make ptestlong gives me three 
errors :

sage -t --long src/sage/rings/padics/padic_lattice_element.py  # Timed out
sage -t --long src/sage/groups/perm_gps/permgroup.py  # 1 doctest failed
sage -t --long src/sage/features/gap.py  # 1 doctest failed

The first one is transient (i.e. passes when ran standalone), the other two are permanent 
(and persist even after "sage -f database_gap", see below) :

charpent@asus16-ec:/usr/local/sage-8$ sage -t --long 
src/sage/groups/perm_gps/permgroup.py
Forcing sage-location, probably because a new package was installed.
Cleaning up, do not interrupt this.
Done cleaning.
too many failed tests, not using stored timings
Running doctests with ID 2018-05-10-10-01-39-e77fca6f.
Git branch: r344_8_3b0
Using 
--optional=database_gap,dot2tex,fricas,giacpy_sage,gmpy2,igraph,mpir,python2,python_igraph,sage
Doctesting 1 file.
sage -t --long src/sage/groups/perm_gps/permgroup.py
**
File "src/sage/groups/perm_gps/permgroup.py", line 1756, in 
sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id
Failed example:
 G.group_primitive_id()# optional - database_gap
Exception raised:
 Traceback (most recent call last):
   File 
"/usr/local/sage-8/local/lib/python2.7/site-packages/sage/doctest/forker.py", 
line 562, in _run
 self.compile_and_execute(example, compiler, test.globs)
   File 
"/usr/local/sage-8/local/lib/python2.7/site-packages/sage/doctest/forker.py", 
line 972, in compile_and_execute
 exec(compiled, globs)
   File "", line 1, in 

 G.group_primitive_id()# optional - database_gap
   File 
"/usr/local/sage-8/local/lib/python2.7/site-packages/sage/groups/perm_gps/permgroup.py",
 line 1775, in group_primitive_id
 GapPackage("prim", spkg="database_gap").require()
   File 
"/usr/local/sage-8/local/lib/python2.7/site-packages/sage/features/__init__.py",
 line 158, in require
 raise FeatureNotPresentError(self, presence.reason, 
presence.resolution)
 FeatureNotPresentError: GAP package prim is not available.
 `TestPackageAvailability("prim")` evaluated to `fail` in GAP.
 To install GAP package prim you can try to run 'sage -i database_gap'.
**
1 item had failures:
1 of   7 in 
sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id
 [832 tests, 1 failure, 9.92 s]
--
sage -t --long src/sage/groups/perm_gps/permgroup.py  # 1 doctest failed
--
Total time for all tests: 10.1 seconds
 cpu time: 6.6 seconds
 cumulative wall time: 9.9 seconds
charpent@asus16-ec:/usr/local/sage-8$ sage -t --long src/sage/features/gap.py
too many failed tests, not using stored timings
Running doctests with ID 2018-05-10-10-01-58-0245b4d8.
Git branch: r344_8_3b0
Using 
--optional=database_gap,dot2tex,fricas,giacpy_sage,gmpy2,igraph,mpir,python2,python_igraph,sage
Doctesting 1 file.
sage -t --long src/sage/features/gap.py
**
File "src/sage/features/gap.py", line 41, in 
sage.features.gap.GapPackage._is_present
Failed example:
 GapPackage("prim", spkg="database_gap").is_present()  # optional: 
database_gap
Expected:
 FeatureTestResult('GAP package prim', True)
Got:
 FeatureTestResult('GAP package prim', False)
**
1 item had failures:
1 of   3 in sage.features.gap.GapPackage._is_present
 [12 tests, 1 failure, 0.50 s]
--
sage -t --long src/sage/features/gap.py  # 1 doctest failed
--
Total time for all tests: 0.5 seconds
 cpu time: 0.5 seconds
 cumulative wall time: 0.5 seconds

The reinstallation of database_gap does not give error or warning.

In both cases, the problem seems to be bound to the 'prim' package of GAP.

Summarily reported againtst database_gap in Trac#25323.

HTH,

--
Emmanuel Charpentier

Le mercredi 9 mai 2018 20:44:17 UTC+2, Volker Braun a écrit :
As always, you can get the latest beta version from the "develop" git branch. 
Alternatively, the self-contained source tarball is at 
http://www.sagemath.org/download-latest.html


8bdc326ba5 (tag: 8.3.beta0, trac/develop) Updated SageMath version to 8.3.beta0
537a270597 Trac #24921: Ad

Re: [sage-release] Re: Sage 8.3.beta0 released

[François Bissey]

I hadn’t looked at it and didn’t really understand the issue. Also I didn’t 
realise
it was a new ticket from the way you said it - I thought you where adding it to 
a related
gap ticket. So it is all fine.

> On 10/05/2018, at 21:46, Emmanuel Charpentier  
> wrote:
> 
> Isn't Trac#25323 good enough ?
> 
> --
> Emmanuel Charpentier
> 
> Le jeudi 10 mai 2018 10:22:06 UTC+2, François Bissey a écrit :
> It is probably an oversight or a corner case in 
> https://trac.sagemath.org/ticket/20382 
> Do open a ticket for that. 
> 
> François 
> 
> > On 10/05/2018, at 20:15, Emmanuel Charpentier  
> > wrote: 
> > 
> > On Debian testing running on cote i7 + 16 GB RAM, make ptestlong gives me 
> > three errors : 
> > 
> > sage -t --long src/sage/rings/padics/padic_lattice_element.py  # Timed out 
> > sage -t --long src/sage/groups/perm_gps/permgroup.py  # 1 doctest failed 
> > sage -t --long src/sage/features/gap.py  # 1 doctest failed 
> > 
> > The first one is transient (i.e. passes when ran standalone), the other two 
> > are permanent (and persist even after "sage -f database_gap", see below) : 
> > 
> > charpent@asus16-ec:/usr/local/sage-8$ sage -t --long 
> > src/sage/groups/perm_gps/permgroup.py 
> > Forcing sage-location, probably because a new package was installed. 
> > Cleaning up, do not interrupt this. 
> > Done cleaning. 
> > too many failed tests, not using stored timings 
> > Running doctests with ID 2018-05-10-10-01-39-e77fca6f. 
> > Git branch: r344_8_3b0 
> > Using 
> > --optional=database_gap,dot2tex,fricas,giacpy_sage,gmpy2,igraph,mpir,python2,python_igraph,sage
> >  
> > Doctesting 1 file. 
> > sage -t --long src/sage/groups/perm_gps/permgroup.py 
> > ** 
> > File "src/sage/groups/perm_gps/permgroup.py", line 1756, in 
> > sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id 
> > Failed example: 
> > G.group_primitive_id()# optional - database_gap 
> > Exception raised: 
> > Traceback (most recent call last): 
> >   File 
> > "/usr/local/sage-8/local/lib/python2.7/site-packages/sage/doctest/forker.py",
> >  line 562, in _run 
> > self.compile_and_execute(example, compiler, test.globs) 
> >   File 
> > "/usr/local/sage-8/local/lib/python2.7/site-packages/sage/doctest/forker.py",
> >  line 972, in compile_and_execute 
> > exec(compiled, globs) 
> >   File " > sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id[1]>",
> >  line 1, in  
> > G.group_primitive_id()# optional - database_gap 
> >   File 
> > "/usr/local/sage-8/local/lib/python2.7/site-packages/sage/groups/perm_gps/permgroup.py",
> >  line 1775, in group_primitive_id 
> > GapPackage("prim", spkg="database_gap").require() 
> >   File 
> > "/usr/local/sage-8/local/lib/python2.7/site-packages/sage/features/__init__.py",
> >  line 158, in require 
> > raise FeatureNotPresentError(self, presence.reason, 
> > presence.resolution) 
> > FeatureNotPresentError: GAP package prim is not available. 
> > `TestPackageAvailability("prim")` evaluated to `fail` in GAP. 
> > To install GAP package prim you can try to run 'sage -i database_gap'. 
> > ** 
> > 1 item had failures: 
> >1 of   7 in 
> > sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id 
> > [832 tests, 1 failure, 9.92 s] 
> > -- 
> > sage -t --long src/sage/groups/perm_gps/permgroup.py  # 1 doctest failed 
> > -- 
> > Total time for all tests: 10.1 seconds 
> > cpu time: 6.6 seconds 
> > cumulative wall time: 9.9 seconds 
> > charpent@asus16-ec:/usr/local/sage-8$ sage -t --long 
> > src/sage/features/gap.py 
> > too many failed tests, not using stored timings 
> > Running doctests with ID 2018-05-10-10-01-58-0245b4d8. 
> > Git branch: r344_8_3b0 
> > Using 
> > --optional=database_gap,dot2tex,fricas,giacpy_sage,gmpy2,igraph,mpir,python2,python_igraph,sage
> >  
> > Doctesting 1 file. 
> > sage -t --long src/sage/features/gap.py 
> > ** 
> > File "src/sage/features/gap.py", line 41, in 
> > sage.features.gap.GapPackage._is_present 
> > Failed example: 
> > GapPackage("prim", spkg="database_gap").is_present()  # optional: 
> > database_gap 
> > Expected: 
> > FeatureTestResult('GAP package prim', True) 
> > Got: 
> > FeatureTestResult('GAP package prim', False) 
> > ** 
> > 1 item had failures: 
> >1 of   3 in sage.features.gap.GapPackage._is_present 
> > [12 tests, 1 failure, 0.50 s] 
> > -- 
> > sage -t --long src/sage/features/gap.py  # 

Re: [sage-release] Re: Sage 8.3.beta0 released

[Emmanuel Charpentier]

Isn't Trac#25323  good 
enough ?

--
Emmanuel Charpentier

Le jeudi 10 mai 2018 10:22:06 UTC+2, François Bissey a écrit :
>
> It is probably an oversight or a corner case in 
> https://trac.sagemath.org/ticket/20382 
> Do open a ticket for that. 
>
> François 
>
> > On 10/05/2018, at 20:15, Emmanuel Charpentier  > wrote: 
> > 
> > On Debian testing running on cote i7 + 16 GB RAM, make ptestlong gives 
> me three errors : 
> > 
> > sage -t --long src/sage/rings/padics/padic_lattice_element.py  # Timed 
> out 
> > sage -t --long src/sage/groups/perm_gps/permgroup.py  # 1 doctest failed 
> > sage -t --long src/sage/features/gap.py  # 1 doctest failed 
> > 
> > The first one is transient (i.e. passes when ran standalone), the other 
> two are permanent (and persist even after "sage -f database_gap", see 
> below) : 
> > 
> > charpent@asus16-ec:/usr/local/sage-8$ sage -t --long 
> src/sage/groups/perm_gps/permgroup.py 
> > Forcing sage-location, probably because a new package was installed. 
> > Cleaning up, do not interrupt this. 
> > Done cleaning. 
> > too many failed tests, not using stored timings 
> > Running doctests with ID 2018-05-10-10-01-39-e77fca6f. 
> > Git branch: r344_8_3b0 
> > Using 
> --optional=database_gap,dot2tex,fricas,giacpy_sage,gmpy2,igraph,mpir,python2,python_igraph,sage
>  
>
> > Doctesting 1 file. 
> > sage -t --long src/sage/groups/perm_gps/permgroup.py 
> > ** 
> > File "src/sage/groups/perm_gps/permgroup.py", line 1756, in 
> sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id 
> > Failed example: 
> > G.group_primitive_id()# optional - database_gap 
> > Exception raised: 
> > Traceback (most recent call last): 
> >   File 
> "/usr/local/sage-8/local/lib/python2.7/site-packages/sage/doctest/forker.py", 
> line 562, in _run 
> > self.compile_and_execute(example, compiler, test.globs) 
> >   File 
> "/usr/local/sage-8/local/lib/python2.7/site-packages/sage/doctest/forker.py", 
> line 972, in compile_and_execute 
> > exec(compiled, globs) 
> >   File " sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id[1]>",
>  
> line 1, in  
> > G.group_primitive_id()# optional - database_gap 
> >   File 
> "/usr/local/sage-8/local/lib/python2.7/site-packages/sage/groups/perm_gps/permgroup.py",
>  
> line 1775, in group_primitive_id 
> > GapPackage("prim", spkg="database_gap").require() 
> >   File 
> "/usr/local/sage-8/local/lib/python2.7/site-packages/sage/features/__init__.py",
>  
> line 158, in require 
> > raise FeatureNotPresentError(self, presence.reason, 
> presence.resolution) 
> > FeatureNotPresentError: GAP package prim is not available. 
> > `TestPackageAvailability("prim")` evaluated to `fail` in GAP. 
> > To install GAP package prim you can try to run 'sage -i 
> database_gap'. 
> > ** 
> > 1 item had failures: 
> >1 of   7 in 
> sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id 
> > [832 tests, 1 failure, 9.92 s] 
> > -- 
> > sage -t --long src/sage/groups/perm_gps/permgroup.py  # 1 doctest failed 
> > -- 
> > Total time for all tests: 10.1 seconds 
> > cpu time: 6.6 seconds 
> > cumulative wall time: 9.9 seconds 
> > charpent@asus16-ec:/usr/local/sage-8$ sage -t --long 
> src/sage/features/gap.py 
> > too many failed tests, not using stored timings 
> > Running doctests with ID 2018-05-10-10-01-58-0245b4d8. 
> > Git branch: r344_8_3b0 
> > Using 
> --optional=database_gap,dot2tex,fricas,giacpy_sage,gmpy2,igraph,mpir,python2,python_igraph,sage
>  
>
> > Doctesting 1 file. 
> > sage -t --long src/sage/features/gap.py 
> > ** 
> > File "src/sage/features/gap.py", line 41, in 
> sage.features.gap.GapPackage._is_present 
> > Failed example: 
> > GapPackage("prim", spkg="database_gap").is_present()  # optional: 
> database_gap 
> > Expected: 
> > FeatureTestResult('GAP package prim', True) 
> > Got: 
> > FeatureTestResult('GAP package prim', False) 
> > ** 
> > 1 item had failures: 
> >1 of   3 in sage.features.gap.GapPackage._is_present 
> > [12 tests, 1 failure, 0.50 s] 
> > -- 
> > sage -t --long src/sage/features/gap.py  # 1 doctest failed 
> > -- 
> > Total time for all tests: 0.5 seconds 
> > cpu time: 0.5 seconds 
> > cumulative wall time: 0.5 seconds 
> > 
> > The reinstallation of database_gap does 

Re: [sage-release] Re: Sage 8.3.beta0 released

[Ralf Stephan]

Upgrades fine with clang-5.0.1 on OpenSuSE Linux, clang-6 would not compile
giac I opened #25324.

On Thu, May 10, 2018 at 8:29 AM Henri Girard  wrote:

> On ubuntu I recently had a problem because curl didn't install properly I
> think with bionic I think it's ok
>
> Le 09/05/2018 à 22:11, John H Palmieri a écrit :
>
> Volker, it must be a conscious decision on your part to not include curl,
> git, gcc, and perhaps others in the upstream directory of the
> "self-contained" tarball. Can you explain? Are those the only three
> affected packages, or are there others?
>
> (If we expect people to have internet access while building, why include
> anything in upstream? If we want to allow for people building without
> internet access, why not include all standard packages, even those not
> built on every system?)
>
>   John
>
>
> On Wednesday, May 9, 2018 at 11:44:17 AM UTC-7, Volker Braun wrote:
>>
>> As always, you can get the latest beta version from the "develop" git
>> branch. Alternatively, the self-contained source tarball is at
>> http://www.sagemath.org/download-latest.html
>>
>>
>> 8bdc326ba5 (tag: 8.3.beta0, trac/develop) Updated SageMath version to
>> 8.3.beta0
>> 537a270597 Trac #24921: Add optional package "ninja_build" (build system
>> for polymake)
>> 31df4df870 Trac #24909: Boruvka algorithm for MST
>> ad537e4b5f Trac #24903: optional package autotools fail to build
>> 500d2feb38 Trac #24626: More substantial implementation of matrices over
>> complex ball fields
>> 96987ac2a5 Trac #25076: Fix Matrix_gfpn_dense * int
>> 80adc4fc7a Trac #24878: Improve function? docstring
>> 1968b08e11 Trac #24848: Implement join of polytopes
>> 4a4830018f Trac #24839: py3: an issue about dict iterators
>> ad6ee1bb25 Trac #24742: New MatrixArgs object to deal with constructing
>> matrices
>> 13fd23bb80 Trac #24370: Riemann surfaces: algebraization and automorphisms
>> 9fb25e50bd Trac #19506: Implement cellular algebras
>> 59c99eca6a Trac #16823: Implement the free Lie algebra
>> 70e163d515 Trac #24835: Change error message in construction of
>> polyhedron object
>> e498ec4415 Trac #24788: Multiplication of the Gram Matrix
>> 2c0ee06538 Trac #24680: Cleanup some deprecated functions (matrix and
>> coding)
>> 30c21d31cf Trac #24662: Upgrade scipoptsuite to 5.0.1
>> 0c9519f6c5 Trac #23665: Implement Frobenius formula for Hecke algebra
>> characters
>> d2deec20a0 Trac #24645: Support for spkg-postinst scripts
>> 68e8076fcc Trac #24644: Use $SAGE_SUDO when copying files from
>> SAGE_DESTDIR to SAGE_LOCAL
>> ea439259c1 Trac #24638: Fix OpenBLAS build on SPARC
>> 7e5f242d33 Trac #24623: Euclidean spaces and vector calculus
>> dce704249c Trac #24585: r_jupyter package is broken
>> c46927cb09 Trac #24577: is_genus for torsion quadratic modules
>> 0bdd6f9d39 Trac #24576: Brown invariant of a TorsionQuadraticModule
>> 5cc1dd4967 Trac #24564: Gluing of lattices
>> af11d43628 Trac #24559: py3: better backwards-compatibility for Python
>> longs
>> 3307f67637 Trac #24541: Fix Cone.orthogonal_sublattice
>> 52ab02ee18 Trac #24508: py3: problems with tests that use random_element
>> 87dcf8209d Trac #24481: Replace PARI stackwarn.patch with upstream version
>> 9dabe7b561 Trac #24433: Speed up p-adic Gamma by caching Dwork expansion
>> coefficients
>> 0c6181d7b3 Trac #24416: GeneralDiscreteDistribution broken when entries
>> >= 2^1024
>> 6aa51476fe Trac #24323: 'BrauerAlgebra' has no attribute 'options'
>> e4ec2f6209 Trac #24314: rootfinding for polynomials with complex ball
>> coefficients using arb
>> 79c3ec00ee Trac #24312: py3: fixes to sage.misc.sageinspect
>> 14669b2e42 Trac #24152: Bug when converting a Sage polyhedron into
>> Polymake pexpect
>> 68fd029608 Trac #24130: Reverse plane partitions and Hillman-Grassl
>> 24c396a1de Trac #24129: Complete the standard bijections on the symmetric
>> group
>> b3ce0ca72f Trac #23733: Stop supporting SAGE64 and CFLAG64
>> 94e5a73e75 Trac #23450: Smith form of p-adic matrices
>> 5d8a91b23c Trac #23353: Upgrade to gfan 0.6.2
>> d8c7427822 Trac #23344: p-adic square root
>> 577a9ce597 Trac #22984: Upgrade normaliz to 3.5.3 and pynormaliz to 1.12
>> cd4ad379e2 Trac #22604: autodoc unforking again
>> 9d10e48944 Trac #22572: Add a thematic tutorial on the polyhedron class
>> a24a9c6b30 Trac #22243: Make doctests not depend on the boost version
>> fdf74cc00b Trac #21022: version information in sage.__version__
>> 417875c300 Trac #20382: Replace is_package_installed with Features
>> b4829dabec Trac #19270: Matrix_integer_sparse object has no attribute
>> 'gap'
>> 82025348ef Trac #17340: can't plot immutable graphs
>> b1a0575489 Trac #15729: Graphics3d with fractional opacity will not save
>> image
>> 7926af1fa4 Trac #10577: Deepcopy fails on vectorspaces over GF(2) with
>> inner_product_matrix specified
>> 3c408bc16f Trac #7589: bug in coercion and cyclotomic fields
>> 7d35dbf26c Trac #25118: gfan fails when compiled with XCode 9.3
>> 3c0ce4d54e Trac #24880: gcd is not commutative (on rati

Re: [sage-release] Re: Sage 8.3.beta0 released

[François Bissey]

It is probably an oversight or a corner case in 
https://trac.sagemath.org/ticket/20382
Do open a ticket for that.

François

> On 10/05/2018, at 20:15, Emmanuel Charpentier  
> wrote:
> 
> On Debian testing running on cote i7 + 16 GB RAM, make ptestlong gives me 
> three errors :
> 
> sage -t --long src/sage/rings/padics/padic_lattice_element.py  # Timed out
> sage -t --long src/sage/groups/perm_gps/permgroup.py  # 1 doctest failed
> sage -t --long src/sage/features/gap.py  # 1 doctest failed
> 
> The first one is transient (i.e. passes when ran standalone), the other two 
> are permanent (and persist even after "sage -f database_gap", see below) :
> 
> charpent@asus16-ec:/usr/local/sage-8$ sage -t --long 
> src/sage/groups/perm_gps/permgroup.py
> Forcing sage-location, probably because a new package was installed.
> Cleaning up, do not interrupt this.
> Done cleaning.
> too many failed tests, not using stored timings
> Running doctests with ID 2018-05-10-10-01-39-e77fca6f.
> Git branch: r344_8_3b0
> Using 
> --optional=database_gap,dot2tex,fricas,giacpy_sage,gmpy2,igraph,mpir,python2,python_igraph,sage
> Doctesting 1 file.
> sage -t --long src/sage/groups/perm_gps/permgroup.py
> **
> File "src/sage/groups/perm_gps/permgroup.py", line 1756, in 
> sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id
> Failed example:
> G.group_primitive_id()# optional - database_gap
> Exception raised:
> Traceback (most recent call last):
>   File 
> "/usr/local/sage-8/local/lib/python2.7/site-packages/sage/doctest/forker.py", 
> line 562, in _run
> self.compile_and_execute(example, compiler, test.globs)
>   File 
> "/usr/local/sage-8/local/lib/python2.7/site-packages/sage/doctest/forker.py", 
> line 972, in compile_and_execute
> exec(compiled, globs)
>   File " sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id[1]>",
>  line 1, in 
> G.group_primitive_id()# optional - database_gap
>   File 
> "/usr/local/sage-8/local/lib/python2.7/site-packages/sage/groups/perm_gps/permgroup.py",
>  line 1775, in group_primitive_id
> GapPackage("prim", spkg="database_gap").require()
>   File 
> "/usr/local/sage-8/local/lib/python2.7/site-packages/sage/features/__init__.py",
>  line 158, in require
> raise FeatureNotPresentError(self, presence.reason, 
> presence.resolution)
> FeatureNotPresentError: GAP package prim is not available.
> `TestPackageAvailability("prim")` evaluated to `fail` in GAP.
> To install GAP package prim you can try to run 'sage -i database_gap'.
> **
> 1 item had failures:
>1 of   7 in 
> sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id
> [832 tests, 1 failure, 9.92 s]
> --
> sage -t --long src/sage/groups/perm_gps/permgroup.py  # 1 doctest failed
> --
> Total time for all tests: 10.1 seconds
> cpu time: 6.6 seconds
> cumulative wall time: 9.9 seconds
> charpent@asus16-ec:/usr/local/sage-8$ sage -t --long src/sage/features/gap.py
> too many failed tests, not using stored timings
> Running doctests with ID 2018-05-10-10-01-58-0245b4d8.
> Git branch: r344_8_3b0
> Using 
> --optional=database_gap,dot2tex,fricas,giacpy_sage,gmpy2,igraph,mpir,python2,python_igraph,sage
> Doctesting 1 file.
> sage -t --long src/sage/features/gap.py
> **
> File "src/sage/features/gap.py", line 41, in 
> sage.features.gap.GapPackage._is_present
> Failed example:
> GapPackage("prim", spkg="database_gap").is_present()  # optional: 
> database_gap
> Expected:
> FeatureTestResult('GAP package prim', True)
> Got:
> FeatureTestResult('GAP package prim', False)
> **
> 1 item had failures:
>1 of   3 in sage.features.gap.GapPackage._is_present
> [12 tests, 1 failure, 0.50 s]
> --
> sage -t --long src/sage/features/gap.py  # 1 doctest failed
> --
> Total time for all tests: 0.5 seconds
> cpu time: 0.5 seconds
> cumulative wall time: 0.5 seconds
> 
> The reinstallation of database_gap does not give error or warning.
> 
> In both cases, the problem seems to be bound to the 'prim' package of GAP.
> 
> Summarily reported againtst database_gap in Trac#25323.
> 
> HTH,
> 
> --
> Emmanuel Charpentier
> 
> Le mercredi 9 mai 2018 20:44:17 UTC+2, Volker Braun a écrit :
> As always, you can get the latest beta version from the "develop" git branch. 
> Alternatively, the self-contained source tarball is at 
> http://www.sagemath

[sage-release] Re: Sage 8.3.beta0 released

[Emmanuel Charpentier]

On Debian testing running on cote i7 + 16 GB RAM, make ptestlong gives me 
three errors :

sage -t --long src/sage/rings/padics/padic_lattice_element.py  # Timed out
sage -t --long src/sage/groups/perm_gps/permgroup.py  # 1 doctest failed
sage -t --long src/sage/features/gap.py  # 1 doctest failed

The first one is transient (i.e. passes when ran standalone), the other two 
are permanent (and persist even after "sage -f database_gap", see below) :

charpent@asus16-ec:/usr/local/sage-8$ sage -t --long 
src/sage/groups/perm_gps/permgroup.py
Forcing sage-location, probably because a new package was installed.
Cleaning up, do not interrupt this.
Done cleaning.
too many failed tests, not using stored timings
Running doctests with ID 2018-05-10-10-01-39-e77fca6f.
Git branch: r344_8_3b0
Using 
--optional=database_gap,dot2tex,fricas,giacpy_sage,gmpy2,igraph,mpir,python2,python_igraph,sage
Doctesting 1 file.
sage -t --long src/sage/groups/perm_gps/permgroup.py
**
File "src/sage/groups/perm_gps/permgroup.py", line 1756, in 
sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id
Failed example:
G.group_primitive_id()# optional - database_gap
Exception raised:
Traceback (most recent call last):
  File 
"/usr/local/sage-8/local/lib/python2.7/site-packages/sage/doctest/forker.py", 
line 562, in _run
self.compile_and_execute(example, compiler, test.globs)
  File 
"/usr/local/sage-8/local/lib/python2.7/site-packages/sage/doctest/forker.py", 
line 972, in compile_and_execute
exec(compiled, globs)
  File "",
 
line 1, in 
G.group_primitive_id()# optional - database_gap
  File 
"/usr/local/sage-8/local/lib/python2.7/site-packages/sage/groups/perm_gps/permgroup.py",
 
line 1775, in group_primitive_id
GapPackage("prim", spkg="database_gap").require()
  File 
"/usr/local/sage-8/local/lib/python2.7/site-packages/sage/features/__init__.py",
 
line 158, in require
raise FeatureNotPresentError(self, presence.reason, 
presence.resolution)
FeatureNotPresentError: GAP package prim is not available.
`TestPackageAvailability("prim")` evaluated to `fail` in GAP.
To install GAP package prim you can try to run 'sage -i database_gap'.
**
1 item had failures:
   1 of   7 in 
sage.groups.perm_gps.permgroup.PermutationGroup_generic.group_primitive_id
[832 tests, 1 failure, 9.92 s]
--
sage -t --long src/sage/groups/perm_gps/permgroup.py  # 1 doctest failed
--
Total time for all tests: 10.1 seconds
cpu time: 6.6 seconds
cumulative wall time: 9.9 seconds
charpent@asus16-ec:/usr/local/sage-8$ sage -t --long 
src/sage/features/gap.py
too many failed tests, not using stored timings
Running doctests with ID 2018-05-10-10-01-58-0245b4d8.
Git branch: r344_8_3b0
Using 
--optional=database_gap,dot2tex,fricas,giacpy_sage,gmpy2,igraph,mpir,python2,python_igraph,sage
Doctesting 1 file.
sage -t --long src/sage/features/gap.py
**
File "src/sage/features/gap.py", line 41, in 
sage.features.gap.GapPackage._is_present
Failed example:
GapPackage("prim", spkg="database_gap").is_present()  # optional: 
database_gap
Expected:
FeatureTestResult('GAP package prim', True)
Got:
FeatureTestResult('GAP package prim', False)
**
1 item had failures:
   1 of   3 in sage.features.gap.GapPackage._is_present
[12 tests, 1 failure, 0.50 s]
--
sage -t --long src/sage/features/gap.py  # 1 doctest failed
--
Total time for all tests: 0.5 seconds
cpu time: 0.5 seconds
cumulative wall time: 0.5 seconds

The reinstallation of database_gap does not give error or warning.

In both cases, the problem seems to be bound to the 'prim' package of GAP.

Summarily reported againtst database_gap in Trac#25323 
.

HTH,

--
Emmanuel Charpentier

Le mercredi 9 mai 2018 20:44:17 UTC+2, Volker Braun a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
>
> 8bdc326ba5 (tag: 8.3.beta0, trac/develop) Updated SageMath version to 
> 8.3.beta0
> 537a270597 Trac #24921: Add optional package "ninja_build" (build system 
> for polymake)
> 31df4df870 Trac #24909: Boruvka algorithm for MST
> ad537e4b5f Trac #24903: optional package autotools fail to build
> 500d2feb38 Trac #24626: More substantial implementation of matrices over 
> complex ball fie

[sage-release] Re: Sage 8.2 released

[Enrique Artal]

Python3, yes. I put the output of gdb below

El jueves, 10 de mayo de 2018, 8:27:56 (UTC+2), Dima Pasechnik escribió:
>
> Well, fire up gdb, look at the place it crashes...
>
> It is python3, right? So it would help to see what F28 does with python3, 
> and why it works outside of sage.
>

   Message: Process 28762 (python) of user 1000 dumped core. 

   Stack trace of thread 28762: 
   #0  0x7fcabcc2cc81 __strlen_avx2 (libc.so.6) 
   #1  0x7fcabd9dd158 do_mkvalue 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #2  0x7fcabd9dda2e va_build_value 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #3  0x7fcabd9ddaee Py_BuildValue 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #4  0x7fcab5e0a801 crypt_crypt_impl 
(_crypt.cpython-36m-x86_64-linux-gnu.so) 
   #5  0x7fcabd925ed5 _PyCFunction_FastCallDict 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #6  0x7fcabd9b1f3f call_function 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #7  0x7fcabd9b564f _PyEval_EvalFrameDefault 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #8  0x7fcabd9b1b3a _PyEval_EvalCodeWithName 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #9  0x7fcabd9b1dd2 fast_function 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #10 0x7fcabd9b564f _PyEval_EvalFrameDefault 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #11 0x7fcabd9b1b3a _PyEval_EvalCodeWithName 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #12 0x7fcabd9b218f PyEval_EvalCodeEx 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #13 0x7fcabd9b21bb PyEval_EvalCode 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #14 0x7fcabd9af19d builtin_exec_impl 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #15 0x7fcabd926085 PyCFunction_Call 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #16 0x7fcabd9b9098 do_call_core 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #17 0x7fcabd9b1b3a _PyEval_EvalCodeWithName 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #18 0x7fcabd9b1dd2 fast_function 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #19 0x7fcabd9b564f _PyEval_EvalFrameDefault 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #20 0x7fcabd9b2139 _PyFunction_FastCall 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #21 0x7fcabd9b564f _PyEval_EvalFrameDefault 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #22 0x7fcabd9b2139 _PyFunction_FastCall 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #23 0x7fcabd9b564f _PyEval_EvalFrameDefault 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #24 0x7fcabd9b2139 _PyFunction_FastCall 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #25 0x7fcabd9b564f _PyEval_EvalFrameDefault 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #26 0x7fcabd9ba77f _PyFunction_FastCall 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #27 0x7fcabd8be76e _PyObject_FastCallDict 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #28 0x7fcabd8bf844 _PyObject_CallMethodIdObjArgs 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #29 0x7fcabd9d4781 PyImport_ImportModuleLevelObject 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #30 0x7fcabd9b9515 import_name 
(/usr/local/sagegit/local/var/tmp/sage/build/python3-3.6.1.p1/src/libpython3.6m.so.1.0)
 

   #31 0x7fcabd9b1b3a _PyEval_Eval