Dear All,
Installed the CCP4 6.4.0 version recently on CentoS 5. When I try to run
phaser I get the following error. Apparently I can reproduce the error
for different reflection file. This happens after getting the rotation,
translation and packing function. Any suggestions to this problem
With regards
S. Karthikeyan
__
सूक्ष्मजीव प्रौद्योगिकी संस्थान (वैज्ञानिक औद्योगिक अनुसंधान परिषद)
Institute of Microbial Technology (A CONSTITUENT ESTABLISHMENT OF CSIR)
सैक्टर 39 ए, चण्डीगढ़ / Sector 39-A, Chandigarh
पिन
If you have break in the protein chain, this problem will occur. Put TER card
in the PDB file where ever the chain break is there, then run SFCHECK. The .ps
output now will be complete and should be able to see in the viewer.
HTH
-Karthik
Dear all,
I have been trying to compare a
Hi,
Similar problem occured even in CCP4-6.1.0 in our case. So, we used to take the
phaser output model and do rigid body refinement with REFMAC and see the density
(in coot), which normally much better than output from PHASER mtz. I am not sure
whether it is for case to case or it is general
Dear All,
I am looking for def.site file for HKL2000 used in ESRF-BM14 beam line. We
collected the data using MAR 225 CCD detector. The following link does not seem
to work for me.
http://www.esrf.fr/exp_facilities/BM14/runexperiment/bm14-def.site
We need this file to process our data in the
Dear All,
I got the file. Thanks a lot for the same. I apologize for posting a 'non-CCP4'
question to the CCP4BB.
With regards
S.Karthikeyan
Dear All,
I am looking for def.site file for HKL2000 used in ESRF-BM14 beam line. We
collected the data using MAR 225 CCD detector. The following
Hi,
Following mail (retrived from ccp4bb archieve) may help for intechanging the
cell axis.
HTH
S.Karthikeyan
==
I have a CCP4 script for this:
http://bl831.als.lbl.gov/~jamesh/elves/scripts/reindex.com
If you run the script like
