Re: [Freesurfer] fmriprep to fsfast interface

2018-05-07 Thread Boggess, Matthew Jozsef
Subject: Re: [Freesurfer] fmriprep to fsfast interface I'm not sure what you mean to apply the tal without a registration. Do you mean without resampling? We don't have anything that will do that for a 12dof registration. On 05/04/2018 05:11 PM, Boggess, Matthew Jozsef wrote: > >

Re: [Freesurfer] fmriprep to fsfast interface

2018-05-04 Thread Boggess, Matthew Jozsef
not, I will just try re-registering as you suggested, but I am hoping to minimize the extra processing steps. Thanks, Matt From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Boggess, Matthew Jozsef Sent: Friday, April 20, 2018 8:13:11 AM To

Re: [Freesurfer] fmriprep to fsfast interface

2018-04-20 Thread Boggess, Matthew Jozsef
-boun...@nmr.mgh.harvard.edu on behalf of Douglas Greve Sent: Tuesday, April 17, 2018 12:01:46 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] fmriprep to fsfast interface sorry for the delay, see below On 4/14/18 10:00 AM, Boggess, Matthew Jozsef wrote: Hello, I just want

Re: [Freesurfer] fmriprep to fsfast interface

2018-04-14 Thread Boggess, Matthew Jozsef
Hello, I just wanted to follow up to see if anyone could help with any of my questions, particularly # 1. Thank you! Matt Boggess From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Boggess, Matthew Jozsef Sent: Thursday, April 5, 2018 8:02:07 AM

[Freesurfer] fmriprep to fsfast interface

2018-04-05 Thread Boggess, Matthew Jozsef
Hello, I've been working on taking the outputs of the fmriprep BOLD preprocessing tool (https://fmriprep.readthedocs.io/en/latest/index.html) and coercing them into the fsfast structure so that first levels can be run with mkanalysis-sess and selxavg3b-sess. It's been a bit trickier than antici