Hi Paul,
Looks like they are working on a new version of the plugin:
https://github.com/makson96/Dynamics/pull/95
You could give this modified version a try:
https://github.com/speleo3/Dynamics/blob/no-tk-mainloop/pymol_plugin_dynamics.py
Cheers,
Thomas
> On May 17, 2018, at 1:50 PM, Paul Bus
Dear Users,
I’ve been able to use Pymol 1.7 with Gromacs plugin ( ppa download and install
), but have not found a plugin/method to use version2.1.1 ( Schrodinger
maintained ).
Is a plugin for v 2.1.1 available ?
System is linux Mint 18.1
Regards
Paul
--
Hi Raúl,
the pymol 1.2r1 package in Ubuntu (lucid) loads xtc files fine, it has
the VMD plugins enabled. As far as I know this is the same package as in
debian (at least in squeeze, http://packages.debian.org/squeeze/pymol).
If you compile from source, you can apply the attached patch.
Cheer
Dear all,
I think there is no easy way of reading Gromacs xtc trajectories into PyMOL,
At least in the version compiled for Debian, which I don't think
includes the vmd plugins.
I should have probably asked about this before, but now I just coded a
little script that loads xtc in pymol. It has
