Hi Nicholas,
You can use the "split_states" command.
https://pymolwiki.org/index.php/Split_states
Cheers,
Thomas
On Wed, Mar 16, 2022 at 6:57 AM Nicholas Gao wrote:
>
> Dear PyMOL users,
>
> I have an antibody-antigen structure where the authors have put the antigen
> atoms in state 1 and
I have been using VMD for most of my MD analysis, but I am trying to learn
PyMol now. I know how to load a pdb and a dcd onto that pdb. But how do I
measure the RMSD of each frame in the DCD aligned to the starting structure,
and then output a graph like of RMSD vs frame? Doing this through