On 03-Mar-08 03:19:01, Wensui Liu wrote:
> HI, John,
> my understanding is that you should use log(...) instead of its
> original scale. Below is the logic in the case of poisson reg.
> log(y / offset) = x'b
> => log(y) - log(offset) = x'b
> => log(y) = x'b + log(offset)
Well, this is where it get
Hi R experts
I'm trying to emigrate from SPSS to R, thou I have some problems whit
getting R to distinguish between the different kind of missing.
I want to distinguish between data that are missing because a
respondent refused to answer and data that are missing because the
question didn't
Suppose I have following dataset :
> head(data1)
Date Return
1 03/31/00 0.14230650
2 04/28/00 -0.03276228
3 05/31/00 -0.06527890
4 06/30/00 -0.04999873
5 07/31/00 -0.01447902
6 08/31/00 0.22265729
Now I convert it to zoo object :
> data11 = zoo(data1[,2], as.Date(data1[,1],
Hi
I've experienced some unpleasant behaviour while attempting to connect to an
Empress 8.6.2 RDBMS via RODBC 1.2-3 and a freshly minted R 2.6.2.pat on a SLED
linux system where a call to odbcConnect() to initiate the odbc connection
causes R 2.6.2.pat to segfault.
The odbcConnect call is
CHA
>
> it doesn't seem indicate any installation instruction.
> http://cran.r-project.org/web/packages/xlsReadWrite/index.html
As Wensui Liu already mentioned, installation is the same as with other
packages: In the RGui menu select Packages->Install Packages...->(Select a
CRAN mirror)->(Select the
Please consult the help page for png.
On Mon, 3 Mar 2008, Ng Stanley wrote:
> Hi,
>
> I have installed R on a computational cluster, and am using putty to access
> R. Please help on how to solve the problem of saving png files.
>
>> png(file="myplot.png", bg="transparent")
> Error in X11(paste("p
This is a homework problem. I know how to do a PCA, you need to learn.
I suggest you visit your textbook, then check the documentation for R's
various PCA implementations to work out how to effect the analysis.
phthao05 wrote:
> I have an exercise. With 3 kinds of yohourt a,b,c. There are 25
>
Hello R users,
I'm wondering whether it is possible to manage big data set in R? I
have a data set with 3 million rows and 3 columns (X,Y,Z), where X is
the group id. For each X, I need to run 2 regression on the submatrix.
I used the function "split":
datamatrix<-read.csv("datas.csv", header=F,
Hello R users,
I'm wondering whether it is possible to manage big data set in R? I
have a data set with 3 million rows and 3 columns (X,Y,Z), where X is
the group id. For each X, I need to run 2 regression on the submatrix.
I used the function "split":
datamatrix<-read.csv("datas.csv", header=F,
Dear list members,
I am trying to get information on how to fit a linear regression with
constrained parameters. Specifically, I have 8 predictors , their
coeffiecients should all be non-negative and add up to 1. I understand it is
a quadratic programming problem but I have no experience in the su
I have an exercise. With 3 kinds of yohourt a,b,c. There are 25
participatients estimate 3 norms: taste (va,vb,vc), structure (ca,cb,cc) and
price (ga,gb,gc) and give the mark from 1 to 5. I don't know how to PCA this
data. Please help me!
I attached the data file follow:
Va Vb Vc C
Hi
William Morris wrote:
> How can I insert a vector image in svg or pdf format into a plot.
> Basically i need the equivalent of what the 'pixmap' package does for
> bitmap images.
'grImport'
See ...
http://cran.r-project.org/web/packages/grImport/index.html
http://www.stat.auckland.ac.nz
On Sun, 2 Mar 2008, Gabor Grothendieck wrote:
> You can do this:
>
> Lines <- "A,B
> 1,2
> 3,4"
> DF <- read.csv(textConnection(Lines))
>
> which is slightly simpler than the examples there.
Thank you Gabor,
I made it even simpler by replacing the Lines object with a string
contstant.
It wor
hi, Dear R users -
I wonder is there a written R function to convert a number to a text, say
convert 1 to "one" , 100 to "one hundred". I know in xls. has such a function
BAHTTEXT, does anybody know is there a similar function in R ? Thanks.
Lin
-
i think you simply install it in the way you install other R packages.
On Sun, Mar 2, 2008 at 10:40 PM, Christophe Lo <[EMAIL PROTECTED]> wrote:
> thanks for your response. How do i install it? I try looking at the manual
> it doesn't seem indicate any installation instruction. I also download a
>
thanks for your response. How do i install it? I try looking at the manual
it doesn't seem indicate any installation instruction. I also download a
windows version but it doesn't have an exe file.
http://cran.r-project.org/web/packages/xlsReadWrite/index.html
Newbie,
Kei
On 3/3/08, Wensui Liu <
hi,
did you try write.xls in xlsReadWrite package?
On Sun, Mar 2, 2008 at 9:59 PM, Keizer_71 <[EMAIL PROTECTED]> wrote:
>
> Here is my R Code
>
> x<-1:2
> y<-2:141
> data.matrix<-data.matrix(data[,y])#create data.matrix
> variableprobe<-apply(data.matrix[x,],1,var)
> variableprobe #outp
Yes, use the log. I've had the same problem in the past, too. Try it on
a toy example to confirm it for yourself.
Cheers,
Simon.
On Sun, 2008-03-02 at 22:01 -0500, John Sorkin wrote:
> R 2.6.0
> Windows XP
>
> A question about running a generalized linear model.
>
> I am running a glm with
> (
HI, John,
my understanding is that you should use log(...) instead of its
original scale. Below is the logic in the case of poisson reg.
log(y / offset) = x'b
=> log(y) - log(offset) = x'b
=> log(y) = x'b + log(offset)
On Sun, Mar 2, 2008 at 10:01 PM, John Sorkin
<[EMAIL PROTECTED]> wrote:
> R 2.
Hi,
I have installed R on a computational cluster, and am using putty to access
R. Please help on how to solve the problem of saving png files.
> png(file="myplot.png", bg="transparent")
Error in X11(paste("png::", filename, sep = ""), width, height, pointsize,
:
unable to start device PN
If you are asking how to convert to multiple columns in Excel, look at
the "text to column" option in I think the data tab.
On Sun, Mar 2, 2008 at 9:59 PM, Keizer_71 <[EMAIL PROTECTED]> wrote:
>
> Here is my R Code
>
> x<-1:2
> y<-2:141
> data.matrix<-data.matrix(data[,y])#create data.matrix
>
R 2.6.0
Windows XP
A question about running a generalized linear model.
I am running a glm with
(1) a poisson distribution and a log link:
family=poisson(link = "log")
and an offset.
I would like to know if I should express the offset as the log of the offset
value, i.e.
offset=log(NumUniqPt)
Here is my R Code
x<-1:2
y<-2:141
data.matrix<-data.matrix(data[,y])#create data.matrix
variableprobe<-apply(data.matrix[x,],1,var)
variableprobe #output variance across probesets
hist(variableprobe) #displaying histogram of variableprobe
write.table(cbind(data[1],
Variance=apply(data[,y],1,
Thanks Paul.
As always you spend an hour searching and find nothing, if i'd used
the search term "import" instead of "insert" I would have found it in
2 secs.
Lesson learnt, again.
Cheers,
Will Morris
On 03/03/2008, at 12:50 PM, Paul Murrell wrote:
> Hi
>
>
> William Morris wrote:
>> How ca
On 3/03/2008, at 1:58 PM, Louise Hoffman wrote:
> What if I need to calculate the variance for the fuel data?
>
> Are there a 'R' way to do that?
>
> I have derived
> variance = (Y-x*theta)^T * (Y - x*theta) / (n-p)
This should be (something like)
tr((Y - X%*%theta))%*%(Y-X%*%theta)/(n-
Hi, John,
you don't have to switch to linux in order to use ess + emacs with R.
just follow the installation instruction of ess and it will take you 5
minutes at most. i also feel that xemacs seems more friendly than
gnuemacs for windows user.
On Sun, Mar 2, 2008 at 3:40 PM, John Sorkin <[EMAIL PR
How can I insert a vector image in svg or pdf format into a plot.
Basically i need the equivalent of what the 'pixmap' package does for
bitmap images.
Cheers,
Will Morris
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-
John Sorkin grecc.umaryland.edu> writes:
> Can anyone suggest a document that I might read?
I would suggest the ess manual itself:
http://stat.ethz.ch/ESS/ess.pdf
and John Fox's document:
http://socserv.mcmaster.ca/jfox/Books/Companion/ESS/ess-xemacs.pdf.
Even though the latter deals wit
I'm not familiar with "the Schuster system", but
RSiteSearch("Schuster") produced 34 hits and RSiteSearch("river", "fun")
produced 133 for me just now.
If this does not lead you to an answer to your question, PLEASE do
read the posting guide http://www.R-project.org/posting-guide.h
I am using the same get-em-all approach as yours.
FYI. it is about 2G with all packages installed.
On Sun, Mar 2, 2008 at 4:52 PM, Murray Jorgensen
<[EMAIL PROTECTED]> wrote:
> Having just update to R 2.6.2 on my old Windows laptop I notice that the
> number of packages is growing exponentially
What if I need to calculate the variance for the fuel data?
Are there a 'R' way to do that?
I have derived
variance = (Y-x*theta)^T * (Y - x*theta) / (n-p)
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read
1. Can I avoid having RODBC use so much memory (35 times the data size or more)
making a data.frame & then .rda file via. sqlQuery/save?
2. If not, is there some more appropriate way from w/in R to pull large data
sets (2-5GB) into .rda files from sql?
[R] reducing RODBC odbcQuery memory use?
You can do this:
Lines <- "A,B
1,2
3,4"
DF <- read.csv(textConnection(Lines))
which is slightly simpler than the examples there.
On Sun, Mar 2, 2008 at 5:59 PM, Gene Selkov <[EMAIL PROTECTED]> wrote:
> Hi Dirk,
>
> I didn't at first pay attention to your comment about littler, as my
> original
> Unfortunately, x^(-1) is not the inverse of x:
>
> x<-matrix(c(2,4,4,5),nrow=2)
> x
> # [,1] [,2]
> # [1,]24
> # [2,]45
>
> x^(-1)
> # [,1] [,2]
> # [1,] 0.50 0.25
> # [2,] 0.25 0.20
>
> i.e. it is the matrix which you get by applying the operation
> (...)^(-
> This is certainly ***NOT*** correct. (If you really got those numbers
> from Matlab, then Matlab is up to Puttee.)
It was my mistake =) I had calculated the straight line so the edge of
the plot was the y-axis =)
> Have you plotted your data?
>
> (1) Fitting a straight line is ridicu
On Mon, 2008-03-03 at 10:52 +1300, Murray Jorgensen wrote:
> Having just update to R 2.6.2 on my old Windows laptop I notice that the
> number of packages is growing exponentially and my usual approach of
> get-em-all may not be viable much longer. Has any thought been given to
> dividing "contr
Hi Dirk,
I didn't at first pay attention to your comment about littler, as my
original problem of plotting to stdout was solved. But it was just part of
the larger problem: I actually need to be piping the data with the code
for making the picture in, and getting the picture out without opening
Calum wrote:
> OK this is bound to be something silly as I'm completely new to R -
> having started using it yesterday. However I am already warming to its
> lack of 'proper' GUI... I like being able to rerun a command by editing
> one parameter easily... try and do that in a Excel Chart Wizzar
Hi everybody!
I try to implements Self-Organizing Maps with R and the Kohonen package.
I have made an algorithm that try differents width and height. For each
step, Silhouette index, Davies-Bouldin index and Dunn index are computed.
However, there is always after severals minutes a *Runtime error*
Using linux fedora 8 (x86_64) I get the following when firefox is
already running. Is there a way to adjust settings in either R or
firefox to open a new tab when help.start() is invoked? Thanks.
--Dale
> help.start()
Making links in per-session dir ...
If '/usr/bin/firefox' is already running,
"Pete Dorothy" <[EMAIL PROTECTED]> wrote in
news:[EMAIL PROTECTED]:
> Hello,
>
> I am sorry for asking such a basic question. I could not find an
> answer to it using google.
>
> I have a discrete variable (a vector x) taking for example the
> following values : 0, 3, 4, 3, 15, 5, 6, 5
>
>
OK this is bound to be something silly as I'm completely new to R -
having started using it yesterday. However I am already warming to its
lack of 'proper' GUI... I like being able to rerun a command by editing
one parameter easily... try and do that in a Excel Chart Wizzard!
I eventually want
Thanks, Katherine! Now I wonder what, in particular, Peirce
might have had in mind (he was a particularly sharp
philosophical thinker, and might be expected to pay attention
to the "semantic baggage" of what he said).
I'm also enjoying the other delightful "OT" (= "On Tangent")
responses that my q
Having just update to R 2.6.2 on my old Windows laptop I notice that the
number of packages is growing exponentially and my usual approach of
get-em-all may not be viable much longer. Has any thought been given to
dividing "contributed" binaries into a recommended set, perhaps a couple
of hundr
On Mar 2, 2008, at 4:12 PM, Nair, Murlidharan T wrote:
> Is there a method to list the components of an object, instead of
> looking at the help for that method? Let me be more clear with an
> example
>
> data(iris)
> ## tune `svm' for classification with RBF-kernel (default in svm),
> ##
Louise Hoffman wrote:
>> At the suggestion of many people, I have installed emacs on my linux (Fedora
>> 8.0) computer with the intention of using emacs as window interface to R
>> (2.6.0). I have gone though the emacs tutorial and don't see any information
>> about how I should use emacs to run
On Sun, 2008-03-02 at 21:45 +0100, Louise Hoffman wrote:
> > At the suggestion of many people, I have installed emacs on my linux
> (Fedora 8.0) computer with the intention of using emacs as window
> interface to R (2.6.0). I have gone though the emacs tutorial and
> don't see any information about
There is some information and references regarding the name 'normal' in
the internet article 'Earliest Known Uses of Some of the Words of
Mathematics (N)', http://members.aol.com/jeff570/n.html, by John Aldrich.
It contains the comment, "Galton does not explain why he uses the term
"normal" but th
Is there a method to list the components of an object, instead of looking at
the help for that method? Let me be more clear with an example
data(iris)
## tune `svm' for classification with RBF-kernel (default in svm),
## using one split for training/validation set
obj <- tune(svm, Species
On 02-Mar-08 20:18:29, Louise Hoffman wrote:
> Dear readers
>
> I would like to make General Linear Model (GLM) for the
> following data set http://louise.hoffman.googlepages.com/fuel.csv
>
> The code I have written is
>
> fuelData<-read.table('fuel.csv',header=TRUE, sep=',')
> n<-dim(fuelData)[
On 3/03/2008, at 9:18 AM, Louise Hoffman wrote:
> Dear readers
>
> I would like to make General Linear Model (GLM) for the following
> data set
> http://louise.hoffman.googlepages.com/fuel.csv
>
> The code I have written is
>
> fuelData<-read.table('fuel.csv',header=TRUE, sep=',')
> n<-dim(fuel
Pete,
try
x <- c(0, 3, 4, 3, 15, 5, 6, 5)
table(x)
or
length(table(x))
Cheers
Andrew
On Sun, Mar 02, 2008 at 09:27:20PM +0100, Pete Dorothy wrote:
> Hello,
>
> I am sorry for asking such a basic question. I could not find an answer to
> it using google.
>
> I have a discrete variable (a
Johannes Hüsing huesing.name> writes:
>
> Am 02.03.2008 um 17:44 schrieb Gabor Csardi:
>
> > I'm not a statistician, but do i remember well that among all
> > distributions with a given mean and variance, the normal distribution
> > has the highest entropy? This is good enough for me to call it
Try table(), with the name of your vector inside the parentheses.
Ben
-Original Message-
From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED]
On Behalf Of Pete Dorothy
Sent: Sunday, March 02, 2008 2:27 PM
To: r-help@r-project.org
Subject: [PS] [R] discrete variable
Hello,
I am sorry for a
On 02-Mar-08 20:27:20, Pete Dorothy wrote:
> Hello,
>
> I am sorry for asking such a basic question. I could not find
> an answer to it using google.
>
> I have a discrete variable (a vector x) taking for example the
> following values : 0, 3, 4, 3, 15, 5, 6, 5
>
> Is it possible to know how man
See
> length(unique(x))
[1] 6
> table(x)
On 02/03/2008, Pete Dorothy <[EMAIL PROTECTED]> wrote:
> Hello,
>
> I am sorry for asking such a basic question. I could not find an answer to
> it using google.
>
> I have a discrete variable (a vector x) taking for example the following
> values : 0, 3,
> At the suggestion of many people, I have installed emacs on my linux (Fedora
> 8.0) computer with the intention of using emacs as window interface to R
> (2.6.0). I have gone though the emacs tutorial and don't see any information
> about how I should use emacs to run R. Can anyone suggest a d
At the suggestion of many people, I have installed emacs on my linux (Fedora
8.0) computer with the intention of using emacs as window interface to R
(2.6.0). I have gone though the emacs tutorial and don't see any information
about how I should use emacs to run R. Can anyone suggest a document
On 02/03/2008, Emilio Gagliardi <[EMAIL PROTECTED]> wrote:
> Henrique,
>
> Again, thank you very much for your code snippets, I am learning from them,
> but they are also creating as many questions as answers...
>
> On Sun, Mar 2, 2008 at 11:48 AM, Henrique Dallazuanna <[EMAIL PROTECTED]>
> wrote:
Hello,
I am sorry for asking such a basic question. I could not find an answer to
it using google.
I have a discrete variable (a vector x) taking for example the following
values : 0, 3, 4, 3, 15, 5, 6, 5
Is it possible to know how many different values (modalities) it takes ?
Here it takes 6 di
Dear readers
I would like to make General Linear Model (GLM) for the following data set
http://louise.hoffman.googlepages.com/fuel.csv
The code I have written is
fuelData<-read.table('fuel.csv',header=TRUE, sep=',')
n<-dim(fuelData)[1]
xOnes<- matrix(1,nrow=n,ncol=1)
x<-cbind(xOnes,fuelData[,3])
unfortunately, it is not showing probeID
Henrique Dallazuanna wrote:
>
> Try this:
>
> write.table(cbind(data.matrix[1], Variance = apply(data.matrix[,-1],
> 1, var)),file='file.xls')
>
>
> On 02/03/2008, Keizer_71 <[EMAIL PROTECTED]> wrote:
>>
>> sorry...in step 4-i need the R code to
Henrique,
Again, thank you very much for your code snippets, I am learning from them,
but they are also creating as many questions as answers...
On Sun, Mar 2, 2008 at 11:48 AM, Henrique Dallazuanna <[EMAIL PROTECTED]>
wrote:
> Then you can try this:
>
> apply(array(as.vector(sapply(patt, get)),
Am 02.03.2008 um 17:44 schrieb Gabor Csardi:
> I'm not a statistician, but do i remember well that among all
> distributions with a given mean and variance, the normal distribution
> has the highest entropy? This is good enough for me to call it
> "normal"
There's more. Among all rotation-sym
Hello,
My name is Ion Andronache and I am a candidate for a doctor's degree on
geomorphology in Braila, Romania. I would like to ask for some advice. I
would like to make an analysis on the Danube's flow capacity and to
determine the circles and periodicity using the Schuster system. I
understood
Hi
Louise Hoffman wrote:
> [snip]
>> Seriously. Be specific if you have a problem. (read the posting guide). R
>> can
>> also plot. If you don't like R's plots (which I could not understand) you
>> can
>> export data and import them to gnuplot. So what?
>
> Okay, my post was not very good.
Then you can try:
rownames(data.matrix) <- as.character(data.matrix$ProbeID)
data.matrix <- data.matrix[-1]
as.matrix(apply(data.matrix1, 1, var))
or
out <- apply(data.matrix1, 1, var)
data.frame(ProbeID = names(out), Variance = unname(out))
Works for me
On 02/03/2008, Keizer_71 <[EMAIL PROT
Dear All,
I'm trying to teach myself latex along with the latex function in Hmisc
and have hit a roadblock that I can't seem to get around. I'd greatly
appreciate any pointers.
I'm running R 2.6.0 on Windows XP and have Miktex 2.7 installed.
I've reproduced the code below, taken from Frank Ha
ArunPrasad uark.edu> writes:
> I am looking for a package in R which can help me in using the
> imputation technique to find the missing values for my regression analysis.
The recommended search for imputation in r-project gave me 400 citations. I
assume you have tried this.
Diete
Then you can try this:
apply(array(as.vector(sapply(patt, get)), dim = c(dim(get(patt[1])),
ngroups, nsubs)), 1:3, mean)
For create the matrices in a loop one option is:
lapply(seq(1, 51, by=10), function(x)matrix(seq(x, x+8), nrow=3, ncol=3))
On 02/03/2008, Emilio Gagliardi <[EMAIL PROTECTE
Hi Henrique,
Thank you for your help, but it doesn't produce what I'm looking for...
On Sun, Mar 2, 2008 at 10:50 AM, Henrique Dallazuanna <[EMAIL PROTECTED]>
wrote:
> One options is:
>
> data.1 <- matrix(seq(from=1,to=9,by=1),nrow=3,ncol=3)
> data.2 <- matrix(seq(from=11,to=19,by=1),nrow=3,ncol
Hi Henrique,
It is definitely better, but it doesn't show me the ProbeID which identify
the probes name
Here was the result when i export to excel with your code.
"Variance"
1 2.425509867 21.6216446425273
any suggestions?
thanks,
Kei
Keizer_71 wrote:
>
> Hello,
>
> Thanks everyon
Hi Dimitris and everyone
I tried this but now I know why it didn't work out for me initially.
> t1=matrix(1:10,5,2)
> t2=matrix(1,5,1)
> t2
[,1]
[1,]1
[2,]1
[3,]1
[4,]1
[5,]1
> t1
[,1] [,2]
[1,]16
[2,]27
[3,]38
[4,]49
[5,]5 10
>
Try this:
write.table(cbind(data.matrix[1], Variance = apply(data.matrix[,-1],
1, var)),file='file.xls')
On 02/03/2008, Keizer_71 <[EMAIL PROTECTED]> wrote:
>
> sorry...in step 4-i need the R code to output in this format when i export
> to
> excel.
>
> ProbeID Variance
> 1
Brilliant!
> t1=matrix(1:15,5,3)
> t1
[,1] [,2] [,3]
[1,]16 11
[2,]27 12
[3,]38 13
[4,]49 14
[5,]5 10 15
> t2=1:5
> t2
[1] 1 2 3 4 5
> sweep(t1, 1, t2)
[,1] [,2] [,3]
[1,]05 10
[2,]05 10
[3,]05 10
[4,]0
Hi Mark, (CC'ing r-help)
Only need to change the parameter from 1 to 2 after that it worked great. Thanks
> t1=matrix(1:15,5,3)
> t1
[,1] [,2] [,3]
[1,]16 11
[2,]27 12
[3,]38 13
[4,]49 14
[5,]5 10 15
> t2=1:5
> t2
[1] 1 2 3 4 5
>
try this:
mat <- matrix(1:9, 3, 3, TRUE)
dat <- as.data.frame(mat)
vec <- 1:3
result.mat <- mat - vec
result.dat <- dat - vec
result.mat
result.dat
I hope it helps.
Best,
Dimitris
Dimitris Rizopoulos
Biostatistical Centre
School of Public Health
Catholic University of Leuven
Address: Ka
Try this:
sweep(mat, 1, vec)
On 02/03/2008, Bo Zhou <[EMAIL PROTECTED]> wrote:
>
> How to do this in an elegant way formatrix/data frame/zoo?
>
> mat=
> 1 2 3
> 4 5 6
> 7 8 9
>
> vector=
> 1
> 2
> 3
>
>
> result=
> 0 1 2
> 2 3 4
> 4 5 6
>
> ie
> 1-1 2-1 3-1
> 4-2 5-2 6-2
> 7-3 8-3 9-3
>
>
One options is:
data.1 <- matrix(seq(from=1,to=9,by=1),nrow=3,ncol=3)
data.2 <- matrix(seq(from=11,to=19,by=1),nrow=3,ncol=3)
data.3 <- matrix(seq(from=21,to=29,by=1),nrow=3,ncol=3)
data.4 <- matrix(seq(from=31,to=39,by=1),nrow=3,ncol=3)
data.5 <- matrix(seq(from=41,to=49,by=1),nrow=3,ncol=3)
data
Hi everyone,
I am looking for a package in R which can help me in using the
imputation technique to find the missing values for my regression analysis.
Any help would be appreciated.
Cheers
Arun
--
View this message in context:
http://www.nabble.com/Imputation-Packages-tp15790749p
hello everybody
i was seeking a converter beetween R regression output (eg with
summary) and the conventional way to present regression output in
paper: every model as a vertical vector with \beta, t beetween
parenthesis below the first, and other statistics (R^2 etc) .
I've seen hmisc and xtable
sorry...in step 4-i need the R code to output in this format when i export to
excel.
ProbeID Variance
1 224588_at 21.58257457
thanks
Keizer_71 wrote:
>
> Hello,
>
> Thanks everyone for helping me with the previous queries.
>
> step 1: Here is the orginal data: shor
How to do this in an elegant way formatrix/data frame/zoo?
mat=
1 2 3
4 5 6
7 8 9
vector=
1
2
3
result=
0 1 2
2 3 4
4 5 6
ie
1-1 2-1 3-1
4-2 5-2 6-2
7-3 8-3 9-3
Thanks in advance.
_
08
[[alternative HTML version
Hello,
Thanks everyone for helping me with the previous queries.
step 1: Here is the orginal data: short sample
ProbeID Sample_1_D Sample_1_CSample_2_D Sample_2_C
1 224588_at 2.425509867 11.34031409 11.46868531 11.75741478
step 2: i calculate the v
Hi everyone,
I'm sure this is simple, but I can't seem to figure this out.
Situation. 3 different groups of subjects each submit n X n matrices of
scores. What I want to do is aggregate each group of scores into a summary
n X n matrix. I need the result to be a matrix so that I can calculate a
Charles Willis gmail.com> writes:
>
> Hello,
>
> I am running the program COMPAR.GEE within the package APE. My dependent
> variable is binomial, while my independent variable is a multi-state
> categorical variable. The output reports an estimate for each state of the
> independent variable ex
roger koenker ysidro.econ.uiuc.edu> writes:
>
> A nice survey of this territory is:
>
>
http://books.google.com/books?id=TN3_d7ibo30C&pg=PA85&lpg=PA85&dq=stigler+normal+oxymoron&source=web&ots=OwGhmnDk3O&sig=J7ou_L8-_Mu4L14c3KJAhefrD4I&hl=en
>
> I particularly like the phrase: "[normal] is in
I'm not a statistician, but do i remember well that among all
distributions with a given mean and variance, the normal distribution
has the highest entropy? This is good enough for me to call it
"normal"
Gabor
On Sun, Mar 02, 2008 at 10:10:21AM -0600, roger koenker wrote:
> A nice survey of
Keizer_71 <[EMAIL PROTECTED]> wrote in
news:[EMAIL PROTECTED]:
> All i want is to export my list into c: drive and save it as csv
> file and manually import into Excel.
>
> I have the read the article but i am having issues
> http://pbil.univ-lyon1.fr/library/base/html/write.table.html
>
>
>>
A nice survey of this territory is:
http://books.google.com/books?id=TN3_d7ibo30C&pg=PA85&lpg=PA85&dq=stigler+normal+oxymoron&source=web&ots=OwGhmnDk3O&sig=J7ou_L8-_Mu4L14c3KJAhefrD4I&hl=en
I particularly like the phrase: "[normal] is in this respect
a rare one-word oxymoron."
url:www.econ.
R uses unix type slashes that is "/" rather than "\"
even if you're using Windows
You probably need either to write
file ="c:/foo.csv" or escape the "\" thusly
file =
> "c:\\foo.csv"
Either way should work. Personally find it easier to
use '/".
--- Keizer_71 <[EMAIL PROTECTED]> wrote:
>
> H
You will likely need to escape that backslash, i.e. "c:\\foo.csv".
Haris Skiadas
Department of Mathematics and Computer Science
Hanover College
On Mar 2, 2008, at 10:12 AM, Keizer_71 wrote:
>
> Hi,
>
> All i want is to export my list into c: drive and save it as csv
> file and
> manually impor
> There is a very basic interface between R and gnuplot in the TeachingDemos
> package. Look at the help for gp.plot.
[snip]
This looks mighty interesting =)
Is it possible to plot "with lines" (gnuplot syntex) so all the data
points are connected?
Also is it possible to make it write the outpu
Thanks. Problem solved.
> rollapply(x,3,force, align="left")
1 1 2 3
2 2 3 4
3 3 4 5
4 4 5 6
5 5 6 7
6 6 7 8
7 7 8 9
8 8 9 10
> x<-1:10
> embed(x, 3)[, 3:1]
[,1] [,2] [,3]
[1,]123
[2,]234
[3,]345
[4,]456
[5,]567
[6,
Hi,
All i want is to export my list into c: drive and save it as csv file and
manually import into Excel.
I have the read the article but i am having issues
http://pbil.univ-lyon1.fr/library/base/html/write.table.html
> excel<-write.table(probe_gene, file = "c:\foo.csv", sep = ",", col.names =
Try:
rollapply(x, 3, force)
or
embed(x, 3)[, 3:1]
On Sun, Mar 2, 2008 at 9:53 AM, Bo Zhou <[EMAIL PROTECTED]> wrote:
>
> I needed that matrix for following calculations. So I don't think roll*
> would work for me.
>
> Re: embed
>
> > x <- 1:10
> > embed (x, 3)
> [,1] [,2] [,3]
> [1,]3
I needed that matrix for following calculations. So I don't think roll* would
work for me.
Re: embed
> x <- 1:10
> embed (x, 3)
[,1] [,2] [,3]
[1,]321
[2,]432
[3,]543
[4,]654
[5,]765
[6,]876
[7,]987
[8,]
Time to upgrade to the latest version of zoo. You can also read it online
here:
http://cran.r-project.org/web/packages/zoo
On Sun, Mar 2, 2008 at 9:47 AM, Bo Zhou <[EMAIL PROTECTED]> wrote:
> Ah! Gabor is the man.
>
> BTW I don't have zoo-faq. (I actually googled it out)
>
> This is what I have:
Ah! Gabor is the man.
BTW I don't have zoo-faq. (I actually googled it out)
This is what I have:
Vignettes in package zoo:
zoo-quickrefzoo Quick Reference (source, pdf)
zoo zoo: An S3 Class and Methods for Indexed
Totally Ord
See
?embed
and from zoo see:
?rollapply
?rollmean
?rollmax
There is a function coded in C in the caTools package for speed.
On Sun, Mar 2, 2008 at 9:24 AM, Bo Zhou <[EMAIL PROTECTED]> wrote:
>
> Hi Guys,
>
> Need your wisdom on this.
>
> Say I have a time series (in zoo format) like this
>
>
>
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