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>
&
ed from the original sample via
jackknife as 1/6 the coefficient of skewness.)
The script apparently works correctly if the number of resamples
equals or exceeds the number of original data, but not otherwise.
Robert A. LaBudd
argument 'eps' as a default
0.001/n in the calculations makes me suspect the programming in the script.
The script apparently works correctly if the number of resamples
equals or exceeds the number of original data, but not otherwise.
Robert A. LaBudde, PhD, PAS,
uide.html
and provide commented, minimal, self-contained, reproducible code.
========
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Timberlake Dri
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============
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS
, self-contained, reproducible code.
====
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Timberlake Drive Tel: 757-467-0954
Virginia Bea
- within(dd, {
+ a <- as.numeric(as.character(a))
+ b <- as.numeric(as.character(b))
+} )
> str(de)
'data.frame': 20 obs. of 3 variables:
$ a: num 1 1 1 1 2 2 2 2 3 3 ...
$ b: num 1 1 2 2 1 1 2 2 1 1 ...
$ y: num 0.6396 1.467 1.8403 -0.0915 0
his. See
?read.table for some of the options available.
============
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Timberlake Drive Tel: 757-467-0954
Vir
Exactly! Thanks.
At 12:49 AM 6/5/2011, Jorge Ivan Velez wrote:
Dr. LaBudde,
Perhaps
as.numeric(as.character(x))
is what you are looking for.
HTH,
Jorge
On Sun, Jun 5, 2011 at 12:31 AM, Robert A. LaBudde <> wrote:
I have a data frame:
> head(df)
Time Temp Conc ReplLog10
1
06547
22 -20H1 5.738683
37 -20H1 5.796394
4 14 -20H1 4.413691
50 45H1 6.406547
77 45H1 5.705433
but note that the values for 'Temp' in rows 5 and 7 are 45 and not 4,
as expected, although the result is numeric. The
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=
org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
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an
value while
model 1 (generalized mixed model) and model 3
(regular linear model) did not. Also as you can
from the data, prop.success has some value
outside the range 0.15 to 0.85, so maybe regular
linear model may not be appropriate?
Thank you,
John
From: Rober
ted in. So do I really need a mixed model here?
Thanks again
John
From: Bert Gunter
To: Robert A LaBudde
Cc: array chip
Sent: Thu, February 10, 2011 10:04:06 AM
Subject: Re: [R] comparing proportions
Robert:
Yes, exactly. In an offlist email exchange, he clarified this for me,
and I suggest
n/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.
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============
Robert A. LaBudde,
7;t be a problem. The fact that you choose a subsample size of
1 means you won't be able to estimate within-region variances unless
you make some serious assumptions (e.g., UrbanCommunity effect
independent of Region effect).
========
Robe
E do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Timb
)*Gamma(n3)/Gamma(n1+n2+n3)
> beta3<- function (n1, n2, n3)
exp(lgamma(n1)+lgamma(n2)+lgamma(n3)-lgamma(n1+n2+n3))
> beta3(5,3,8)
[1] 1.850002e-07
====
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L
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===========
ship nearby you can see it happen.
Once thing both whales and R users have in common is that, when you
sight one, you say "R, Matey! Thar she blows!"
========
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
the groups.
Rich
Doh!
Thanks.
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Timberlake Drive Tel: 757-467-0954
Virginia
; 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
Residual standard error: 0.1787 on 6 degrees of freedom
Multiple R-squared: 0.7464, Adjusted R-squared: 0.535
F-statistic: 3.532 on 5 and 6 DF, p-value: 0.07811
Why the NA's here?
===
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Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e
e simplest
distribution-free tests should have near perfect power, so which test
you use is not important.
========
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcflt
quot; it.
You need to give us the function and the appropriate limits of
integration.
Can anybody help please?
Code and figures here:
https://docs.google.com/fileview?id=0B1cQ7z9xYFl2ZTZhMmMyMjAtYTA3Zi00N2QyLTkxNzMtOGYyMjdiOGU2ZWE4&hl=en
Thank you,
Claudia
===========
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============
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd
At 07:10 AM 5/7/2010, Duncan Murdoch wrote:
Robert A LaBudde wrote:
At 01:40 PM 5/6/2010, Joris Meys wrote:
On Thu, May 6, 2010 at 6:09 PM, Greg Snow wrote:
Because if you use the sample standard deviation then it is a t test not a
z test.
I'm doubting that seriously...
You calc
a,
the Z and T distribution are identical.
And it is only in Utopia that any P-value less than 0.01 actually
corresponds to reality.
============
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.
1.694695
====
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Timberlake Drive Tel: 757-467-0954
Virginia Beach, VA 23464-3239Fax: 757-467-2947
"Vere scire est pe
read chapters 16 and 17 before deciding which example code to run.
============
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Timberlake Drive
A search on "bluesky...@gmail.com" shows the user is in Norfolk, VA, USA.
At 01:26 PM 3/5/2010, John Sorkin wrote:
The sad part of this interchanges is that Blue Sky does not seem to
be amiable to suggestion. He, or she, has not taken note, or
responded to the fact that a number of people belie
mething to sum all the columns and
rows of the table (or a subset should I desire). I've tried writing 'sum'
for the function, but this gives me a huge figure which can't possibly be
right.
Robert A. LaBu
)
Then do the pairwise tests without familywise
error control. I.e., this is similar to doing the
F test in ANOVA before doing LSD testing.
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations,
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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Robert
ain myself from asking the obvious question of what
possible use gamma(17000) could be to you, and why a simple
"infinity" would not work just as well. I'm sure you must have good
reason for your request.
============
Rober
e-tail
p-value of 4/120 = 0.0333, or a 2-tail p-value of 2*4/120 = 0.067.
This is not, however, what permTS() returns. The permTS() value of
0.05 appears to correspond to 3 patterns, not 4.
I am misunderstanding how to solve this simple problem, or is
something going on with permTS() that I
'
I ended up using
trim <- function(x) gsub("^[[:space:]]+|[[:space:]]+$", "", x)
instead.
At 01:42 PM 9/3/2009, Uwe Ligges wrote:
Robert A. LaBudde wrote:
I have Vista Home with R-2.9.0, and installed and tried to test the
package 'roxygen':
> utils:::menu
m"
I have a similar problem with trim.right(), trim.left() and other
functions I've tried.
Any ideas?
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Timber
nfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
============
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ling list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
============
Robert A. LaBudde, PhD, PAS, Dpl.
E do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.
ined, reproducible code.
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and provide commented, minimal, self-contained, reproducible code.
osting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Timberlake Drive
ning: "no
point within 0.25 inches".
Does identify() work with cloud()? If so, what is the correct syntax.
Thanks.
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.U
lly significant"?
============
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
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Virginia Beach, VA 23464-3239
used. If there are multiple responses all measured at the same times
for the subjects, the term "panel data" is used.
For controlled experiments, the terms "repeated measures" and "time
series" are common. "Longitudinal" could be used, but generally is not.
=
e, as opposed to
discrete times. "Trajectory" also implies an underlying causal model,
as it is a term from kinematics.
I hope this helps.
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd
not, stick with the fixed
effects model.
============
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Timberlake Drive Tel: 757-467-0954
Virginia Beach, VA 23464-3239Fax: 757-46
already exists.
========
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Timberlake Drive Tel: 757-467-0954
Virginia Beach, VA 23464-3239Fax: 757-
osting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.
ing-based approximate
method. The name does create confusion in terminology for
"randomization" tests for bootstrapping.
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Tim
anyone can help me I will be most grateful.
Best regards - J. Capelle
Try http://www.statistics.com/
========
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcflt
- any advice much appreciated!
nicola
Work with events instead of proportions, and use a Poisson model.
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.URL: http://lcflt
most instances, but occasionally I'd
like to perform the analysis directly upon the covariance matrix itself.
Thanks.
========
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: r...@lcfltd.com
Least Cost Formulations, Ltd.
Tura,
M.D,MPH,Ph.D National Institute of Cardiology
Brazil
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ting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
========
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: [EMAIL PROTECTED]
Least Cost Formulations, Ltd.
not take into account the stepwise
>>>> procedure above that was used to torture the data until they
>>>> confessed.
>>>>
>>>> Frank
>>> Please book this as a fortune.
>>>
>>> Dieter
>> Seconded!
>> T
t.
#09.26.08 02.50 binomVarCI.r
#copyright 2008 by Robert A LaBudde, all rights reserved
#CI for binomial sample variance
#created: 09.26.08 by r.a. labudde
#changes:
require('binGroup')
binomVarCI<- function (n, x, conf=0.95) {
p<- x/n #proportion
if (p<0.25 | p>0.75
ieve reasonable coverage.
So I'm still looking for a reliable method for all p and for reasonable n.
The proportion-based method is the best I've found, so far.
============
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: [EMAIL PROTE
#x27;?
Thanks.
========
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: [EMAIL PROTECTED]
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
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"Vere
A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: [EMAIL PROTECTED]
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
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"Vere scire est per causas
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
========
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: [EMAIL PROTECTED]
Least Cost Fo
Richie.
Mathematical Sciences Unit
HSL
============
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: [EMAIL PROTECTED]
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
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Virg
point, the 2.7.2 has the same or new packages than 2.7.1,
most or all of which will work.
5. I use the "Packages|Update Package ..." to update packages to 2.7.2.
6. Then I delete the 2.7.1 subfolder.
You need Administrator rights to do this.
====
x27;t use nAGQ>1, not yet implemented
summary(fit6)
but this ends up with "Error in pgamma(id, shap, scal) : object
"shap" not found".
My questions are:
1. Can this be done?
2. Am I using the right package and function?
3. What am I doing wrong?
Any help would be apprecia
//stat.ethz.ch/mailman/listinfo/r-help
> > PLEASE do read the posting guide
> > http://www.R-project.org/posting-guide.html
> > and provide commented, minimal, self-contained,
> > reproducible code.
>
[[alternative HTML version deleted]]
_
tribution.
If you wish to test how the distribution is
nonnormal, within some family of nonnormal
distributions, you will have to specify such a
null hypothesis and test for deviation from it.
E.g., testing for coefficient of skewness = 0.
ke you to the
asymptotic region. Use sample() to select the
data at random from within your data set to avoid bias in using the test. E.g.,
shapiro.test(sample(mydata, 1000, replace=TRUE))
========
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e
At 03:02 AM 6/30/2008, Robert A. LaBudde wrote:
I'm looking for a package that has a start-of-the-art method of
imputation of missing values in a data frame with both continuous
and factor columns.
I've found transcan() in 'Hmisc', which appears to be possibly
suite
ut how to get a new
data frame with the imputed values replaced (I don't have Herrell's book).
Any pointers would be appreciated.
============
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: [EMAIL PROTECTED]
Least Cost Form
d minimize the number of lines of R.
============
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Least Cost Formulations, Ltd.URL: http://lcfltd.com/
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Is this a homework problem?
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: [EMAIL PROTECTED]
Least Cost Formulations, Ltd.URL: http://lcfltd.com/
824 Timberlake Drive Tel: 757-467-0954
Virginia
to know how to sample X in the first place. Is its
distribution uniform, or something else?
============
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: [EMAIL PROTECTED]
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824 Ti
ex.ac.uk/atto
>
>__
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>PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
>and provide commented, minimal, self-contained, reproducible code.
===
https://stat.ethz.ch/mailman/listinfo/r-help
>PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
>and provide commented, minimal, self-contained, reproducible code.
Robert A. LaBudde,
Now that is simple and elegant. Thanks!
PS. Is there a course available for learning how to read R help information? :)
At 10:52 PM 4/21/2008, Gabor Grothendieck wrote:
> xtabs(count ~., prob1)
>
>On Mon, Apr 21, 2008 at 10:46 PM, Robert A. LaBudde <[EMAIL PROTECTED]> wrote:
&
7 black black yes 6
8 black blackno97
The xtabs() function doesn't seem appropriate, as it has no means of
using 'count'.
This must be a common problem.
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail:
he problem and recompiled tseries which will appear on
>CRAN master within 12 hours.
>
>Best wishes,
>Uwe Ligges
>
>
>Robert A. LaBudde wrote:
>>I have R 2.6.2, and have tried downloading and installing the
>>package "tseries". I get the
;tseries'
>
There doesn't seem to be anything unusual. The package is installed
like any other, and the required file is at C:\Program
Files\R\R-2.6.2\library\tseries\libs\tseries.dll. It is 36,864 bytes
and looks superficially okay.
Any ideas as to what's wrong here?
Thanks.
the interior
>of a general (k-r)-dimensional simplex embedded in
>k dimensions, with (k+1) given vertices?
>
The method of "rejection":
1. Generate numbers randomly in the hypercube.
2. Test to see if the point falls within the prescribed area.
3. Accept the point if it does.
4.
e random variates for X1, X2, based upon whatever
unspecified distribution you wish.
2. Solve the two equations for X3 and X4.
============
Robert A. LaBudde, PhD, PAS, Dpl. ACAFS e-mail: [EMAIL PROTECTED]
Least Cost Formulations, Ltd.
short function
might be useful in picking off peaks (and symmetrically modified, valleys):
#findpeaks()
#Copyright 2007 by Robert A LaBudde, all rights reserved
#find peaks in (x,y) curve
findpeaks<- function(x, y) {
nx<- length(x)
ny<- length(y)
if (nx != ny) {
print (
ge to see what the dependence is.
Frequently curve is flat up to a certain age, and then linear
thereafter. This gives rise to a pseudo-quadratic relationship. You
should be able to fit it better with the split plus a linear term.
5. Think about how age should affect your response before trying model
At 03:54 PM 3/8/2008, David Winsemius wrote:
>"Robert A. LaBudde" <[EMAIL PROTECTED]> wrote in
>news:[EMAIL PROTECTED]:
>
> > Given a set of data with a number of variables plus a response, I'd
> > like to obtain a randomized subset of the rows such
ction marginal proportions as well for some pairs.
This must be a common problem in data mining, but I don't seem to be
able to locate the proper library or function for doing this in R.
Thanks for any help.
========
Robert A. LaBudde, PhD
n the tilt.boot() call.
This must be simple, but I'm not finding out the answer from the documentation.
Also, use of any other packages to accomplish the tilting interval
would also be useful.
Thanks.
Robert A. LaBudde, PhD,
[Resend with proper subject line]
I am trying to compute bootstrap confidence intervals for a sample
using R 2.5.1 for Windows.
I can get "Normal", "Basic", "Percentile", "BCa" and "ABC" from
boot.ci() and boot() in the Davison & Hinkley "boot" package.
But I can't figure out how to use tilt.b
rest? Or, must these summary functions be programmed
>separately to work on a row?
Try using t() to transpose the matrix, and then apply the column
function of interest.
============
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t;R-help@r-project.org mailing list
>https://stat.ethz.ch/mailman/listinfo/r-help
>PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
>and provide commented, minimal, self-contained, reproducible code.
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