commented, minimal, self-contained, reproducible code.
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tel : +32 9 264 59 87
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Ghent University
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\nDataset
Sim : ,
i )
Thank you in advance
Evgenia
Joris Meys writes:
Answers below.
On Thu, Aug 26, 2010 at 11:20 AM, Evgenia ev...@aueb.gr wrote:
Dear users,
***I have a function f to simulate data from a model (example below
used
only to show my problems)
f
://cbio.mskcc.org/~lianos/contact
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tel : +32 9 264 59 87
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Statistical consultant
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Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m
, cells))
} else {
stop('invalid method argument. Should be simple or
bilinear.')
}
}
)
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics
, but don't
see how I should do that. How would I be able to tackle this problem
in an efficient and elegant way?
Thank you in advance
Cheers
Joris
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Joris Meys
Statistical consultant
Ghent University
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Department of Applied mathematics, biometrics and process
(
eval(
substitute(
expression(obj...@extra[[name]] - value)
,env=parent.frame(1) )
)
)
Tried it out and it works.
Cheers
Joris
On Wed, Aug 25, 2010 at 6:21 PM, Steve Lianoglou
mailinglist.honey...@gmail.com wrote:
Hi Joris,
On Wed, Aug 25, 2010 at 11:56 AM, Joris Meys
missing here?
Cheers
Joris
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
---
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is dark. I tried to regenerate the error, but didn't
succeed.
Somebody an idea as to where I have to look for a cause?
Cheers
Joris
On Wed, Jul 28, 2010 at 1:16 PM, Joris Meys jorism...@gmail.com wrote:
Dear all,
I run a gamm with following call :
result - try(gamm(values~ s( VM )+s( RH )+s( TT
, 2010 at 2:27 PM, Joris Meys jorism...@gmail.com wrote:
Dear all,
it gets even more weird. After restarting R, the code I used works
just fine. The call is generated in a function that I debugged using
browser(). Problem is solved, but I have no clue whatsoever how that
error came about. It must
-guide.html
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Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
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-project.org mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
the whole array
lines.
THX
Assa
On Thu, Jul 8, 2010 at 15:20, Joris Meys jorism...@gmail.com wrote:
Don't know what exactly you're trying to do, but you make a matrix
with 11 columns and 50 rows, then treat it as a vector. On top of
that, you try to fill 50 rows/columns with 50 values. Off
per year and sometimes there is apparent relationship in aggregated data
sometimes is not. My opinion is that I can not say much about exact
relations until I have other clues or ways like expected underlaying laws
of physics.
Thanks again
Best regards
Petr
Joris Meys jorism...@gmail.com
-contained, reproducible code.
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
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---
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-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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Ghent University
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Department of Applied mathematics, biometrics
-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
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://stat.ethz.ch/mailman/listinfo/r-help
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Statistical consultant
Ghent University
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Department of Applied
other tweaks.
Actually, the only programs getting there are Microsoft related
applications. If there's no strict need to place a program there, I
stay away from that folder as far as possible. Vista has the same
problem by the way, and obviously the same solutions.
Cheers
Joris
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/listinfo/r-help
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Ghent University
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Statistical consultant
Ghent University
Faculty of Bioscience
-guide.html
and provide commented, minimal, self-contained, reproducible code.
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Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
-project.org/posting-guide.html
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
, reproducible code.
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
---
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commented, minimal, self-contained, reproducible code.
--
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
---
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
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)
Thanks for your reply
- Original Message
From: Joris Meys jorism...@gmail.com
To: Amit Patel amitrh...@yahoo.co.uk
Cc: r-help@r-project.org
Sent: Tue, 6 July, 2010 17:04:40
Subject: Re: [R] Help With ANOVA
We're missing the samp1 etc. in order to be able to test the code.
Where
/listinfo/r-help
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Statistical consultant
Ghent University
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Department of Applied mathematics
if I'm not absolutely sure about what it
does and how it achieves it.
Cheers
Joris
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
to mention, please go ahead. I find bits and pieces on
the internet, but haven't found an overview yet dealing with all
peculiarities of these classes.
Cheers
Joris
On Fri, Jul 2, 2010 at 2:05 PM, Joris Meys jorism...@gmail.com wrote:
Dear all,
I'm getting more and more frustrated
frustrated so easily. I also have Chamber's book and Gentleman's book
is here on the department as well. I'll go again through the relevant
chapters.
Thanks
Joris
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics
read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel
://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m
packages:
[1] svSocket_0.9-48 TinnR_1.0.3 R2HTML_2.0.0Hmisc_3.7-0
survival_2.35-7
loaded via a namespace (and not attached):
[1] cluster_1.12.3 grid_2.10.1lattice_0.18-3 svMisc_0.9-57 tools_2.10.1
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Joris Meys
Statistical consultant
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*slaps forehead*
Thanks. So out it goes, that hyperthreading. Who invented
hyperthreading on a quad-core anyway?
Cheers
Joris
2010/6/29 Uwe Ligges lig...@statistik.tu-dortmund.de:
On 29.06.2010 15:30, Joris Meys wrote:
Dear all,
I've recently purchased a new 64bit system with an intel i7
, John (Jiangtang)
HU, Andre Wielki, Kjetil Halvorsen, Dario Solari, Joris Meys, Keo
Ormsby, Karl Rexer, and Gregory Piatetsky-Shapiro.
If anyone can think of other angles, please let me know.
Cheers,
Bob
=
Bob Muenchen (pronounced Min
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Statistical consultant
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Department
?
|
| * * * *
| *
| *
| *
| *
| *
| *
| * * *
|-
Thanks, Ralf
--
Joris Meys
Statistical consultant
Ghent University
Faculty
to test that?
cheers
Joris
--
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
---
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://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department
.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
---
Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php
, minimal, self-contained, reproducible code.
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Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
---
Disclaimer : http
of equal and unequal sample sizes
For these reasons, I would personally use the t-test for comparing two
samples from the described population. Your mileage may vary.
Cheers
Joris
On 06/25/2010 04:29 AM, Joris Meys wrote:
As a remark on your histogram : use less breaks! This histogram tells
you
.
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.
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Faculty
.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
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a car, the R Code Mustang, that adding for gets
rid
of.
Thanks for getting me back on a topic that I had given up on!
Bob
-Original Message-
From: r-help-boun...@r-project.org
[mailto:r-help-boun...@r-project.org]
On Behalf Of Joris Meys
Sent: Thursday, June 24, 2010 7:56 PM
To: Dario
it into the format 0-10?
Thanks.
On Wed, Jun 23, 2010 at 6:12 PM, Joris Meys jorism...@gmail.com wrote:
see ?cut
Cheers
Joris
On Thu, Jun 24, 2010 at 2:57 AM, Yi liuyi.fe...@gmail.com wrote:
I would like to prepare the data for barplot. But I only have the data
frame
now.
x1
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
of that for two-sided. You shouldn't
ask what we can say. You should ask yourself What was the question
and is this test giving me an answer on that question?
Cheers
Joris
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied
: The method leading to this
result is called Generalized Least Squares estimation (GLS), of which
WLS is just a special case?
Best,
Stats Wolf
On Thu, Jun 24, 2010 at 12:49 PM, Joris Meys jorism...@gmail.com wrote:
Isn't that exactly what you would expect when using a _generalized_
least
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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)
6200 MD Maastricht, The Netherlands Debyeplein 1 (Randwyck)
Original Message
From: r-help-boun...@r-project.org
[mailto:r-help-boun...@r-project.org] On Behalf Of Stats Wolf Sent:
Thursday, June 24, 2010 15:00 To: Joris Meys
Cc: r-help@r-project.org
Subject: Re: [R
.
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
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-project.org/posting-guide.html
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m
, self-contained, reproducible code.
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Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
---
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for advice from Joris Meys,
Now will try to think how to make it working for less specyfic case,
to make the problem more general.
Then the result should be displayed for every group between non empty string
in c2
i.e. not only result for:
#mean:
c1 c3 c4 c5
.
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
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On Fri, Jun 25, 2010 at 12:17 AM, David Winsemius
dwinsem...@comcast.net wrote:
On Jun 24, 2010, at 6:09 PM, Joris Meys wrote:
I do agree that one should not trust solely on sources like wikipedia
and graphpad, although they contain a lot of valuable information.
This said, it is not too
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Statistical consultant
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Faculty
-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics
and provide commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
dangit, tab in the way...
On Fri, Jun 25, 2010 at 1:56 AM, Joris Meys jorism...@gmail.com wrote:
Nice idea, but quite sensitive to search terms, if you compare your
result on ... code with ... code for:
http://www.google.com/insights/search/#q=r%20code%20for%2Csas%20code%20for%2Cspss%20code
)
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
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, Jun 22, 2010 at 7:08 PM, Joris Meys jorism...@gmail.com wrote:
PCA and factor analysis is implemented in the core R distribution, no
extra packages needed. When using princomp, they're in the object.
pr.c - princomp(USArrests,scale=T)
pr.c$scores # gives you the scores
see ?princomp
When
, reproducible code.
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
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Statistical
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
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Statistical consultant
Ghent University
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Department
was the question
and is this test giving me an answer on that question?
Cheers
Joris
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
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deleted]]
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code.
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
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, reproducible code.
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
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On Thu, Jun 24, 2010 at 12:41 AM, Joris Meys jorism...@gmail.com wrote:
Which other Linear Algebra system, and which function did you use in R?
Cheers
Joris
Never mind, off course you used eigen()...
Eigenvectors are only determined up to a constant. If I'm not mistaken
(but check the help
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and provide commented, minimal, self-contained, reproducible code.
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
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Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m
random effects : you don't estimate them, although you
might want to predict them.
Cheers
Joris
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Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
.
Pat
On 21/06/2010 10:32, Joris Meys wrote:
On Mon, Jun 21, 2010 at 11:15 AM, Patrick Burns
pbu...@pburns.seanet.com wrote:
(Statistics is what stuffy professors
do, I just look at my data and try to
figure out what it means.)
Often those stuffy professors have a reason to do so. When
to fit a
bivariate smooth so I cannot use it.
Best wishes,
Carlo
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Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
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@r-project.org mailing list
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Statistical consultant
Ghent University
Faculty of Bioscience
.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
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and provide commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m
read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel
...@uibk.ac.at wrote:
On Tue, 22 Jun 2010, Joris Meys wrote:
Try this :
x.Date - as.Date(2003-02-01) + c(1, 3, 7, 7, 14) - 1
x - zoo(1:5, x.Date)
x
2003-02-01 2003-02-03 2003-02-07 2003-02-07 2003-02-14
1 2 3 4 5
i - match(unique(index(x)),rev(index(x
://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m
errors on the predicted values. No, you shouldn't
predict outside your data space, especially when using splines. And
when interested in 15mg, well, you shouldn't put treatment as a factor
to start with.
Cheers
Joris
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience
]]
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical
.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
---
Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php
the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32
and provide commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
, or an objective measure of
the significance of a hypothesis. But you're right, who cares about
objectiveness these days? It doesn't sell you a paper, does it?
Cheers
Joris
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics
commented, minimal, self-contained, reproducible code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
---
Disclaimer
code.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Applied mathematics, biometrics and process control
tel : +32 9 264 59 87
joris.m...@ugent.be
---
Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php
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