[Bioc-devel] DESeq2 use of assays<-, fixed in v1.27.26

2020-02-20 Thread Michael Love
hi,

Just a short note to developers who have a dependency on DESeq2. The
development version of DESeq2 was giving error the past day because of
a new change to assays<- regarding dimnames, I've just now fixed this
use of assays() throughout, so DESeq2 1.27.26 should build without
error and propagate tomorrow.

Mike

___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel


Re: [Bioc-devel] Bioconductor Developers Forum - Thursday 20th February

2020-02-20 Thread Mike Smith
Dear all,

Just a reminder that the next Developers' Forum is today at 09:00 PST/
12:00 EST / 18:00 CET.  We have two schedule topics for today:

   - Nitesh Turaga will be talking about developments, potential use cases,
   and future directions for the Bioconductor docker containers
   - Robert Castelo is presenting the surprisingly tricky problem of
   determining the exact dependency path that leads to unexpected packages
   being loaded by your code

Looking forward to it.

Mike

On Mon, 17 Feb 2020 at 15:50, Mike Smith  wrote:

> Dear all,
>
> The next Bioconductor Developers' Forum is scheduled for Thursday 20th
> February at 09:00 PST/ 12:00 EST / 18:00 CET
>
> We will be using BlueJeans and  the meeting can be joined via:
>
> https://bluejeans.com/114067881 (Meeting ID: 114 067 881)
>
> If you have any specific topics you'd like to raise please let me know or
> post in #developers-forum on Bioconductor Slack (
> https://bioc-community.herokuapp.com/)
>
> Best wishes,
>
> Mike
>

[[alternative HTML version deleted]]

___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel