Dear Bioconductor Developers,
My package `rmelting` is failing to build on release (3.15) and devel (3.16)
versions for the following systems.
Bioconductor 3.15
- palomino3 (Windows Server 2022 Datacenter / x64)
Bioconductor 3.15
- palomino4 (Windows Server 2022 Datacenter / x64)
- lconway (macOS 12.5.1 Monterey / x86_64)
The error message is as follows.
```
* creating vignettes ... ERROR
--- re-building 'Tutorial.Rmd' using rmarkdown_notangle
.
.
.
.
.
Quitting from lines 195-197 (Tutorial.Rmd)
Error: processing vignette 'Tutorial.Rmd' failed with diagnostics:
java.lang.IllegalAccessException: class RJavaTools cannot access a member of
class java.util.HashMap$KeySet (in module java.base) with modifiers "public
final"
--- failed re-building 'Tutorial.Rmd'
SUMMARY: processing the following file failed:
'Tutorial.Rmd'
```
I am unable to replicate the same on my end.
It seems to be an issue with java. The package is a low level interface to a
software written in Java 1.5 using `rJava`. I have tried with different java
versions upto 1.8.
Any pointers or suggestions to fix the same will be appreciated.
Best Regards,
J. Aravind
Scientist
ICAR-National Bureau of Plant Genetic Resources
New Delhi, India
“SAVE TREE - Please do not print this e-mail unless necessary.”
Disclaimer: The information contained in this electronic message and /or
attachments to this message are intended for the exclusive use of the
addressee(s) and may contain confidential, proprietary or privileged
information. If you are not the intended recipient, any dissemination, use,
review, distribution, printing or copying of the information contained in this
e-mail message and/or attachments to it are strictly prohibited. If you have
received this communication in error, please notify us by reply e-mail or
telephone and immediately destroy all copies of this message and any
attachments.
WARNING: Computer viruses can be transmitted via email. The recipient should
check this email and any attachments for the presence of viruses. The
organization accepts no liability for any damage caused by any virus
transmitted by this email.
www.icar.org.in
[[alternative HTML version deleted]]
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
