[Bioc-devel] Adding git write access for newly accepted package when a key already exists

[Hahsler, Michael]

Hi,

my new rBLAST package was accepted and added to Bioc devel 
(https://bioconductor.org/packages/rBLAST). I got a message stating:

"To use the git.bioconductor.org repository, we need an 'ssh' key to associate 
with your github user name.
If your GitHub account already has ssh public keys 
(https://github.com/mhahsler.keys is not empty), then no further steps are 
required."

I waited a week, and it looks like write access with the key was not added to 
the package rBLAST. I get:
'mhahs...@lyle.smu.edu' has access to the following packages:
rRDP
rRDPData

What do I need to do to get write access to the new package rBLAST?

Regards,
Michael

--
Michael Hahsler
Associate Professor

mhahs...@smu.edu
Department of Computer Science

Bobby B. Lyle School of Engineering

Southern Methodist University

Dallas, TX 75205, USA

Click here for more information (office hours, etc.)


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[Bioc-devel] Missing Java on Windows Development Machine palomino4

[Hahsler, Michael]

Hi,

It looks like Java is not installed on palomino4 
(https://www.bioconductor.org/checkResults/devel/bioc-LATEST/palomino4-NodeInfo.html).

RDP interfaced by rRDP is a Java application.
Package rRDP specifies: SystemRequirements: Java JDK 1.4 or higher
It now fails on the Windows test server (Development):
https://www.bioconductor.org/checkResults/devel/bioc-LATEST/rRDP/

Bioconductor Core Team, please install a JDK on the machine or let me know if 
it is intentionally unavailable on that machine.

Best regards,
Michael

--
Michael Hahsler
Associate Professor

mhahs...@smu.edu<mailto:mhahs...@smu.edu>
Department of Computer Science

Bobby B. Lyle School of Engineering

Southern Methodist University

Dallas, TX 75205, USA

Click here for more information (office hours, 
etc.)<https://michael.hahsler.net/>

From: Rainer Johannes 
Sent: Tuesday, September 26, 2023 1:02 AM
To: Hahsler, Michael 
Cc: bioconductorcoret...@gmail.com 
Subject: Package "rRDP" failing on Bioconductor devel

You don't often get email from johannes.rai...@eurac.edu. Learn why this is 
important<https://aka.ms/LearnAboutSenderIdentification>
Dear package maintainer,

your package "rRDP" is currently failing on the Bioconductor devel branch 
(error for R CMD build on Windows; build report from 2023-09-24). Please have a 
look into this and fix the issue. From the error message it seems that java is 
missing on that build machine. Eventually get in contact with the Bioconductor 
core team for help.

Please use the Bioconductor developer mailing list if you need any help (also 
from Bioconductor core) or have any questions.

Thank you,
Johannes Rainer

Johannes Rainer, PhD

Eurac Research
Institute for Biomedicine
Via A.-Volta 21, I-39100 Bolzano, Italy

email: johannes.rai...@eurac.edu
github: jorainer
mastodon: jorai...@fosstodon.org

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