Re: [Bioc-devel] New maintainer for package - Updating a R package and pushing the commit
I will create your git credentials account and send you the temporary password in a private email. Please do as Herve says by altering the DESCRIPTION and pushing to git.bioconductor.org. You will be responsible for pushing the changes to git.bioconductor.org. You can find many details at https://contributions.bioconductor.org/git-version-control.html Most immediately helpful will probably be the following for assistance setting up remotes: https://contributions.bioconductor.org/git-version-control.html#new-package-workflow Cheers, Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Hervé Pagès Sent: Thursday, September 29, 2022 5:58 PM To: Tulip Nandu ; Kern, Lori ; bioc-devel@r-project.org Subject: Re: [Bioc-devel] New maintainer for package - Updating a R package and pushing the commit Hi Tulip, On 29/09/2022 13:52, Tulip Nandu wrote: > Hi Kern, > > Anusha no longer is associated with the lab. So I will need to have access to > the package. If you can create an account on GitCredentials that would be > great. If that means Anusha is no longer going to maintain the package, then their role in Authors@R would need to be switched from "cre" to "aut" or "ctb" or whatever is appropriate. As Lori said, the Maintainer and Author fields should get removed, and your name and role moved to the Authors@R field. Thanks, H. > > I do have a github account. tulipnandu is the username. > > > https://secure-web.cisco.com/1sz7apuCmn4ohmCI87ibLXfXf2HV76G22UDgL3c3S3mC74LaBD59xyHINjjvQZLobFGBIwBE7uBbAQG37cd6fpIfYTT-kESDUcqUjRDfAHF4aUfYld15UCItSNFsgmKPXcaM9JTp9DMpiG1yWqineSY-XvOvciOmBslTzPrQTjSmnCjcV9Bjig7kPR2UV6bOQ-kee1qnpXXfQRK3WAmpK6A6mAuodm_ae5UfmtS7Obzwxs5SApgpFc0DjM8uCcxyJVpmOWhu7UiHYQdlS9h2j92Jx6qgxDDca79fUi7LcRE1zCLWjNjx7geIuxylxLuBK/https%3A%2F%2Fgithub.com%2Ftulipnandu > [https://secure-web.cisco.com/1WFyb-uH1KKqS_8qxzHe822g-zoOK-K98o8CvfWtriy_VQsnIhXz5TmS-XLutbI4QuJJlr-jDUjeUwXnK_B05kL99Byvz6rZkxnMoOCNuc4beIgaVCv5o9pancBV5rRnZzP0EByH5mcEREDgmAsTRnHU7-cT7OVhSx-_GAPy6VsSjw7mI37X1_FHLlhC0j_3wJrruV-sbUAm00rPfcPt2UzLUjVUKaw-WnB7sS5X7B2D3TaS5K4tYfFi8QZ5khtk6JMvRZNoMMNGU8J5lV38h6T1HFnAA12zDhGTJ_UoiRSff1ndxBOKjZJVJzSb7oNYl/https%3A%2F%2Favatars.githubusercontent.com%2Fu%2F1099843%3Fv%3D4%3Fs%3D400<https://secure-web.cisco.com/1sz7apuCmn4ohmCI87ibLXfXf2HV76G22UDgL3c3S3mC74LaBD59xyHINjjvQZLobFGBIwBE7uBbAQG37cd6fpIfYTT-kESDUcqUjRDfAHF4aUfYld15UCItSNFsgmKPXcaM9JTp9DMpiG1yWqineSY-XvOvciOmBslTzPrQTjSmnCjcV9Bjig7kPR2UV6bOQ-kee1qnpXXfQRK3WAmpK6A6mAuodm_ae5UfmtS7Obzwxs5SApgpFc0DjM8uCcxyJVpmOWhu7UiHYQdlS9h2j92Jx6qgxDDca79fUi7LcRE1zCLWjNjx7geIuxylxLuBK/https%3A%2F%2Fgithub.com%2Ftulipnandu> > tulipnandu - > Overview<https://secure-web.cisco.com/1sz7apuCmn4ohmCI87ibLXfXf2HV76G22UDgL3c3S3mC74LaBD59xyHINjjvQZLobFGBIwBE7uBbAQG37cd6fpIfYTT-kESDUcqUjRDfAHF4aUfYld15UCItSNFsgmKPXcaM9JTp9DMpiG1yWqineSY-XvOvciOmBslTzPrQTjSmnCjcV9Bjig7kPR2UV6bOQ-kee1qnpXXfQRK3WAmpK6A6mAuodm_ae5UfmtS7Obzwxs5SApgpFc0DjM8uCcxyJVpmOWhu7UiHYQdlS9h2j92Jx6qgxDDca79fUi7LcRE1zCLWjNjx7geIuxylxLuBK/https%3A%2F%2Fgithub.com%2Ftulipnandu> > tulipnandu has 10 repositories available. Follow their code on GitHub. > github.com > Also I would need to push the changes in the src file to master on > bioconductor/git. If I can get some help with that, it would be great too. > > Regards, > > Tulip. > > > From: Kern, Lori > Sent: Thursday, September 29, 2022 6:52 AM > To: Tulip Nandu ; bioc-devel@r-project.org > ; Anusha Nagari > Subject: Re: New maintainer for package - Updating a R package and pushing > the commit > > > EXTERNAL MAIL > > This message was sent securely using > Zix�<http://secure-web.cisco.com/1u21LTpbZnpvMlJpYSUJfpcqlUIF9iZZ-XXgvnG9T6wz2HtFzfnPIaY65TC4DlxRu8hrNeUctPgOq5apCZC6W9L9nrnQCU4M9fxtv6CsKzIlYbjasmWlPkHy-kSPDrBBSCGb-l70bhjXVU3QiC2LeQ1QkF9wEnyNAo8O-zak8mE_-PfFPsuZJPqGHz5JAHvRqlHBh1yTeHJFvL7d-ifVibwBMZkCpilJKIZsKdH2LNpjzeUcGBVADV8CvsSa_wjN9sFhogGuDhtam9Uv8AGygibxbVlpSTkM7J0jtB1AKH4XtQUKgq-gLibh-uTSrVBy5/http%3A%2F%2Fwww.zixcorp.com%2Fget-started%2F> > > a few points: > > Normally only one person has maintainer access to a package this currently > was Anusha Nagari . Should they also > retain maintainer access? > > Anusha was assigned because that is who is listed with Authors@R. You > currently have a mixure of using Authors@R and Maintainer/Author field. > Please remove Author/Maintainer fields and only use Authors@R. > > In a normal procedure the currently listed maintainer would request the > switch or additional access. Since I see you listed in the Maintainer field, > we can ignore this step for this situation
Re: [Bioc-devel] New maintainer for package - Updating a R package and pushing the commit
Hi Tulip, On 29/09/2022 13:52, Tulip Nandu wrote: Hi Kern, Anusha no longer is associated with the lab. So I will need to have access to the package. If you can create an account on GitCredentials that would be great. If that means Anusha is no longer going to maintain the package, then their role in Authors@R would need to be switched from "cre" to "aut" or "ctb" or whatever is appropriate. As Lori said, the Maintainer and Author fields should get removed, and your name and role moved to the Authors@R field. Thanks, H. I do have a github account. tulipnandu is the username. https://github.com/tulipnandu [https://avatars.githubusercontent.com/u/1099843?v=4?s=400]<https://github.com/tulipnandu> tulipnandu - Overview<https://github.com/tulipnandu> tulipnandu has 10 repositories available. Follow their code on GitHub. github.com Also I would need to push the changes in the src file to master on bioconductor/git. If I can get some help with that, it would be great too. Regards, Tulip. From: Kern, Lori Sent: Thursday, September 29, 2022 6:52 AM To: Tulip Nandu ; bioc-devel@r-project.org ; Anusha Nagari Subject: Re: New maintainer for package - Updating a R package and pushing the commit EXTERNAL MAIL This message was sent securely using Zix�<http://www.zixcorp.com/get-started/> a few points: Normally only one person has maintainer access to a package this currently was Anusha Nagari . Should they also retain maintainer access? Anusha was assigned because that is who is listed with Authors@R. You currently have a mixure of using Authors@R and Maintainer/Author field. Please remove Author/Maintainer fields and only use Authors@R. In a normal procedure the currently listed maintainer would request the switch or additional access. Since I see you listed in the Maintainer field, we can ignore this step for this situation. I will need to create an account on our GitCredentials where you can manage your ssh keys for access. We can link a github account for access. Do you have a personal github account you would like associated with; if so please provide your github username? Cheers, Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of Tulip Nandu Sent: Wednesday, September 28, 2022 5:15 PM To: bioc-devel@r-project.org Subject: [Bioc-devel] New maintainer for package - Updating a R package and pushing the commit Hi, I'm the new maintainer of the groHMM package which is having issues in its build. In that view I would like to update the package but it won't allow me since my email is not on file with the maintainer of bioconductor package. Can you please list the steps to have me listed as a maintainer and update the package on bioconductor/git. Let me know. Regards, Tulip. UT Southwestern Medical Center The future of medicine, today. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://secure-web.cisco.com/153TPO9q9LgJcIfq7xj6UvgBc8nFbtHT8ZYZQGFIIs9ZSk4A7ilw0CeI7TbK_V6bYIx6ThYomprV1f_aLbd2S7a4YeVDdjcKH03QZSE2kEv9_cNUrEpbkAGk1iajxtenYsDmTonDkJbZIeg-IoB4g0iaPG_jCRjh5agFEcsI__iP6x9liTUj5A10Dg00kng9WU4FVkpjP43oIF598TjRkpatlZZje1T_Uia_oVEIB40G8FCCId7tn4Ma2qwItlJv02H_hbkaC51OFRBiEs01TpHluUuNezGZ0_C3uhIT4KIFVO5xO4VHhGZplznuonJ4r/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. This message was secured by Zix<http://www.zixcorp.com>�. CAUTION: This email originated from outside UTSW. Please be cautious of links or attachments, and validate the sender's email address before replying. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel -- Hervé Pagès Bioconductor Core Team hpages.on.git...@gmail.com ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] New maintainer for package - Updating a R package and pushing the commit
Hi Kern, Anusha no longer is associated with the lab. So I will need to have access to the package. If you can create an account on GitCredentials that would be great. I do have a github account. tulipnandu is the username. https://github.com/tulipnandu [https://avatars.githubusercontent.com/u/1099843?v=4?s=400]<https://github.com/tulipnandu> tulipnandu - Overview<https://github.com/tulipnandu> tulipnandu has 10 repositories available. Follow their code on GitHub. github.com Also I would need to push the changes in the src file to master on bioconductor/git. If I can get some help with that, it would be great too. Regards, Tulip. From: Kern, Lori Sent: Thursday, September 29, 2022 6:52 AM To: Tulip Nandu ; bioc-devel@r-project.org ; Anusha Nagari Subject: Re: New maintainer for package - Updating a R package and pushing the commit EXTERNAL MAIL This message was sent securely using Zix�<http://www.zixcorp.com/get-started/> a few points: Normally only one person has maintainer access to a package this currently was Anusha Nagari . Should they also retain maintainer access? Anusha was assigned because that is who is listed with Authors@R. You currently have a mixure of using Authors@R and Maintainer/Author field. Please remove Author/Maintainer fields and only use Authors@R. In a normal procedure the currently listed maintainer would request the switch or additional access. Since I see you listed in the Maintainer field, we can ignore this step for this situation. I will need to create an account on our GitCredentials where you can manage your ssh keys for access. We can link a github account for access. Do you have a personal github account you would like associated with; if so please provide your github username? Cheers, Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of Tulip Nandu Sent: Wednesday, September 28, 2022 5:15 PM To: bioc-devel@r-project.org Subject: [Bioc-devel] New maintainer for package - Updating a R package and pushing the commit Hi, I'm the new maintainer of the groHMM package which is having issues in its build. In that view I would like to update the package but it won't allow me since my email is not on file with the maintainer of bioconductor package. Can you please list the steps to have me listed as a maintainer and update the package on bioconductor/git. Let me know. Regards, Tulip. UT Southwestern Medical Center The future of medicine, today. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://secure-web.cisco.com/153TPO9q9LgJcIfq7xj6UvgBc8nFbtHT8ZYZQGFIIs9ZSk4A7ilw0CeI7TbK_V6bYIx6ThYomprV1f_aLbd2S7a4YeVDdjcKH03QZSE2kEv9_cNUrEpbkAGk1iajxtenYsDmTonDkJbZIeg-IoB4g0iaPG_jCRjh5agFEcsI__iP6x9liTUj5A10Dg00kng9WU4FVkpjP43oIF598TjRkpatlZZje1T_Uia_oVEIB40G8FCCId7tn4Ma2qwItlJv02H_hbkaC51OFRBiEs01TpHluUuNezGZ0_C3uhIT4KIFVO5xO4VHhGZplznuonJ4r/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. This message was secured by Zix<http://www.zixcorp.com>�. CAUTION: This email originated from outside UTSW. Please be cautious of links or attachments, and validate the sender's email address before replying. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] New maintainer for package - Updating a R package and pushing the commit
a few points: Normally only one person has maintainer access to a package this currently was Anusha Nagari . Should they also retain maintainer access? Anusha was assigned because that is who is listed with Authors@R. You currently have a mixure of using Authors@R and Maintainer/Author field. Please remove Author/Maintainer fields and only use Authors@R. In a normal procedure the currently listed maintainer would request the switch or additional access. Since I see you listed in the Maintainer field, we can ignore this step for this situation. I will need to create an account on our GitCredentials where you can manage your ssh keys for access. We can link a github account for access. Do you have a personal github account you would like associated with; if so please provide your github username? Cheers, Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of Tulip Nandu Sent: Wednesday, September 28, 2022 5:15 PM To: bioc-devel@r-project.org Subject: [Bioc-devel] New maintainer for package - Updating a R package and pushing the commit Hi, I'm the new maintainer of the groHMM package which is having issues in its build. In that view I would like to update the package but it won't allow me since my email is not on file with the maintainer of bioconductor package. Can you please list the steps to have me listed as a maintainer and update the package on bioconductor/git. Let me know. Regards, Tulip. UT Southwestern Medical Center The future of medicine, today. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://secure-web.cisco.com/153TPO9q9LgJcIfq7xj6UvgBc8nFbtHT8ZYZQGFIIs9ZSk4A7ilw0CeI7TbK_V6bYIx6ThYomprV1f_aLbd2S7a4YeVDdjcKH03QZSE2kEv9_cNUrEpbkAGk1iajxtenYsDmTonDkJbZIeg-IoB4g0iaPG_jCRjh5agFEcsI__iP6x9liTUj5A10Dg00kng9WU4FVkpjP43oIF598TjRkpatlZZje1T_Uia_oVEIB40G8FCCId7tn4Ma2qwItlJv02H_hbkaC51OFRBiEs01TpHluUuNezGZ0_C3uhIT4KIFVO5xO4VHhGZplznuonJ4r/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
[Bioc-devel] New maintainer for package - Updating a R package and pushing the commit
Hi, I'm the new maintainer of the groHMM package which is having issues in its build. In that view I would like to update the package but it won't allow me since my email is not on file with the maintainer of bioconductor package. Can you please list the steps to have me listed as a maintainer and update the package on bioconductor/git. Let me know. Regards, Tulip. UT Southwestern Medical Center The future of medicine, today. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
