Re: [Bioc-devel] Maintainer change Bioconductor packages

2021-05-11 Thread Nitesh Turaga 
Hi,

I added gene-expression to get package access.

Please activate the account 
https://git.bioconductor.org/BiocCredentials/account_activation. Add “new” SSH 
keys. Change the password.

gene-expression will then have access to the package, and like I mentioned 
before the changes on the package itself will be on your end to make.

Change the maintainer email, subscribe to bioc-devel etc.

Best,

Nitesh

From: Nitesh Turaga 
Date: Tuesday, May 11, 2021 at 7:59 AM
To: Pablo Moreno 
Cc: Suhaib Mohammed , maintai...@bioconductor.org 
, bioc-devel@r-project.org 
, gene-express...@ebi.ac.uk 

Subject: Re: Maintainer change Bioconductor packages
Hi,

I think this might be possible to try.

So the maintainer email again has to be changed from your end on the 
DESCRIPTION file.

As far as access goes, I can add 
gene-express...@ebi.ac.uk, on the 
BiocCredentials system. You’ll have to activate the account and add SSH keys.

gene-express...@ebi.ac.uk will also have to 
follow all the protocols of a maintainer, so someone will have to actively 
monitor it and subscribe to 
bioc-devel@r-project.org mailing list.

Best,

Nitesh


From: Pablo Moreno 
Date: Sunday, May 9, 2021 at 10:32 PM
To: Nitesh Turaga 
Cc: Suhaib Mohammed , maintai...@bioconductor.org 
, bioc-devel@r-project.org 
, gene-express...@ebi.ac.uk 

Subject: Re: Maintainer change Bioconductor packages
Dear Nitesh,

I think that in the rush of Suhaib leaving, we didn’t finalise this process.

Is it acceptable to have a group email/account as maintainer? We would have 
gene-express...@ebi.ac.uk, which email gets to all the Expression Atlas team 
members. Then we wouldn’t need to repeat the process if any of us leaves.

Thanks,
Pablo

> On 28 Jan 2021, at 18:27, Nitesh Turaga  wrote:
>
> Hi Suhaib,
>
> You are correct, the maintainer needs to be changed if you are unable to 
> maintain the package further. You need to nominate another maintainer for the 
> packages you listed.
>
> Once the new maintainer steps in,
>
> 1. Change the Maintainer or Authors@R field in the DESCRIPTION file of the 
> package to reflect the change.
>
> 2. Maintainer has to have a BiocCredentials account.
>
> 3. Maintainer has to be subscripted to bioc-devel@r-project.org mailing list.
>
> Best,
>
> Nitesh
>
>
> On 1/28/21, 7:00 AM, "Suhaib Mohammed"  wrote:
>
>To whom ever it may concern,
>
>I have been maintaining the Bioconductor R packages (ExpressionAtlas and
>ArrayExpress) of Gene Expression Atlas team at the EMBL-EBI. As I will
>be leaving EBI, I understand the maintainer needs to be changed. Could
>you point to the procedure for changing the maintainer ?
>
>Expression Atlas -
>https://bioconductor.org/packages/release/bioc/html/ExpressionAtlas.html
>Array Express -
>https://bioconductor.org/packages/release/bioc/html/ArrayExpress.html
>
>Many thanks,
>Suhaib
>
>--
>Suhaib Mohammed, Ph.D.
>Senior Bioinformatician
>European Bioinformatics Institute (EMBL-EBI)
>European Molecular Biology Laboratory
>Wellcome Trust Genome Campus
>Hinxton, Cambridge CB10 1SD
>United Kingdom
>tel : +44-1223494296
>email: suh...@ebi.ac.uk
>

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Re: [Bioc-devel] Maintainer change Bioconductor packages

2021-05-11 Thread Nitesh Turaga 
Hi,

I think this might be possible to try.

So the maintainer email again has to be changed from your end on the 
DESCRIPTION file.

As far as access goes, I can add 
gene-express...@ebi.ac.uk, on the 
BiocCredentials system. You’ll have to activate the account and add SSH keys.

gene-express...@ebi.ac.uk will also have to 
follow all the protocols of a maintainer, so someone will have to actively 
monitor it and subscribe to 
bioc-devel@r-project.org mailing list.

Best,

Nitesh


From: Pablo Moreno 
Date: Sunday, May 9, 2021 at 10:32 PM
To: Nitesh Turaga 
Cc: Suhaib Mohammed , maintai...@bioconductor.org 
, bioc-devel@r-project.org 
, gene-express...@ebi.ac.uk 

Subject: Re: Maintainer change Bioconductor packages
Dear Nitesh,

I think that in the rush of Suhaib leaving, we didn’t finalise this process.

Is it acceptable to have a group email/account as maintainer? We would have 
gene-express...@ebi.ac.uk, which email gets to all the Expression Atlas team 
members. Then we wouldn’t need to repeat the process if any of us leaves.

Thanks,
Pablo

> On 28 Jan 2021, at 18:27, Nitesh Turaga  wrote:
>
> Hi Suhaib,
>
> You are correct, the maintainer needs to be changed if you are unable to 
> maintain the package further. You need to nominate another maintainer for the 
> packages you listed.
>
> Once the new maintainer steps in,
>
> 1. Change the Maintainer or Authors@R field in the DESCRIPTION file of the 
> package to reflect the change.
>
> 2. Maintainer has to have a BiocCredentials account.
>
> 3. Maintainer has to be subscripted to bioc-devel@r-project.org mailing list.
>
> Best,
>
> Nitesh
>
>
> On 1/28/21, 7:00 AM, "Suhaib Mohammed"  wrote:
>
>To whom ever it may concern,
>
>I have been maintaining the Bioconductor R packages (ExpressionAtlas and
>ArrayExpress) of Gene Expression Atlas team at the EMBL-EBI. As I will
>be leaving EBI, I understand the maintainer needs to be changed. Could
>you point to the procedure for changing the maintainer ?
>
>Expression Atlas -
>https://bioconductor.org/packages/release/bioc/html/ExpressionAtlas.html
>Array Express -
>https://bioconductor.org/packages/release/bioc/html/ArrayExpress.html
>
>Many thanks,
>Suhaib
>
>--
>Suhaib Mohammed, Ph.D.
>Senior Bioinformatician
>European Bioinformatics Institute (EMBL-EBI)
>European Molecular Biology Laboratory
>Wellcome Trust Genome Campus
>Hinxton, Cambridge CB10 1SD
>United Kingdom
>tel : +44-1223494296
>email: suh...@ebi.ac.uk
>

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Re: [Bioc-devel] Maintainer change Bioconductor packages

2021-05-10 Thread Pablo Moreno 
Dear Nitesh,

I think that in the rush of Suhaib leaving, we didn’t finalise this process.

Is it acceptable to have a group email/account as maintainer? We would have 
gene-express...@ebi.ac.uk, which email gets to all the Expression Atlas team 
members. Then we wouldn’t need to repeat the process if any of us leaves.

Thanks,
Pablo

> On 28 Jan 2021, at 18:27, Nitesh Turaga  wrote:
> 
> Hi Suhaib,
> 
> You are correct, the maintainer needs to be changed if you are unable to 
> maintain the package further. You need to nominate another maintainer for the 
> packages you listed. 
> 
> Once the new maintainer steps in, 
> 
> 1. Change the Maintainer or Authors@R field in the DESCRIPTION file of the 
> package to reflect the change. 
> 
> 2. Maintainer has to have a BiocCredentials account. 
> 
> 3. Maintainer has to be subscripted to bioc-devel@r-project.org mailing list. 
> 
> Best,
> 
> Nitesh 
> 
> 
> On 1/28/21, 7:00 AM, "Suhaib Mohammed"  wrote:
> 
>To whom ever it may concern,
> 
>I have been maintaining the Bioconductor R packages (ExpressionAtlas and 
>ArrayExpress) of Gene Expression Atlas team at the EMBL-EBI. As I will 
>be leaving EBI, I understand the maintainer needs to be changed. Could 
>you point to the procedure for changing the maintainer ?
> 
>Expression Atlas - 
>https://bioconductor.org/packages/release/bioc/html/ExpressionAtlas.html
>Array Express - 
>https://bioconductor.org/packages/release/bioc/html/ArrayExpress.html
> 
>Many thanks,
>Suhaib
> 
>-- 
>Suhaib Mohammed, Ph.D.
>Senior Bioinformatician
>European Bioinformatics Institute (EMBL-EBI)
>European Molecular Biology Laboratory
>Wellcome Trust Genome Campus
>Hinxton, Cambridge CB10 1SD
>United Kingdom
>tel : +44-1223494296
>email: suh...@ebi.ac.uk
> 

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Re: [Bioc-devel] Maintainer change Bioconductor packages

2021-01-28 Thread Nitesh Turaga 
Hi Suhaib,

You are correct, the maintainer needs to be changed if you are unable to 
maintain the package further. You need to nominate another maintainer for the 
packages you listed. 

Once the new maintainer steps in, 

1. Change the Maintainer or Authors@R field in the DESCRIPTION file of the 
package to reflect the change. 

2. Maintainer has to have a BiocCredentials account. 

3. Maintainer has to be subscripted to bioc-devel@r-project.org mailing list. 

Best,

Nitesh 


On 1/28/21, 7:00 AM, "Suhaib Mohammed"  wrote:

To whom ever it may concern,

I have been maintaining the Bioconductor R packages (ExpressionAtlas and 
ArrayExpress) of Gene Expression Atlas team at the EMBL-EBI. As I will 
be leaving EBI, I understand the maintainer needs to be changed. Could 
you point to the procedure for changing the maintainer ?

Expression Atlas - 
https://bioconductor.org/packages/release/bioc/html/ExpressionAtlas.html
Array Express - 
https://bioconductor.org/packages/release/bioc/html/ArrayExpress.html

Many thanks,
Suhaib

-- 
Suhaib Mohammed, Ph.D.
Senior Bioinformatician
European Bioinformatics Institute (EMBL-EBI)
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Hinxton, Cambridge CB10 1SD
United Kingdom
tel : +44-1223494296
email: suh...@ebi.ac.uk

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[Bioc-devel] Maintainer change Bioconductor packages

2021-01-28 Thread Suhaib Mohammed 

To whom ever it may concern,

I have been maintaining the Bioconductor R packages (ExpressionAtlas and 
ArrayExpress) of Gene Expression Atlas team at the EMBL-EBI. As I will 
be leaving EBI, I understand the maintainer needs to be changed. Could 
you point to the procedure for changing the maintainer ?


Expression Atlas - 
https://bioconductor.org/packages/release/bioc/html/ExpressionAtlas.html
Array Express - 
https://bioconductor.org/packages/release/bioc/html/ArrayExpress.html


Many thanks,
Suhaib

--
Suhaib Mohammed, Ph.D.
Senior Bioinformatician
European Bioinformatics Institute (EMBL-EBI)
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Hinxton, Cambridge CB10 1SD
United Kingdom
tel : +44-1223494296
email: suh...@ebi.ac.uk

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