Re: [Bioc-devel] commit changes with scenario 1

2016-08-16 Thread Dan Tenenbaum 


- Original Message -
> From: "Karim Mezhoud" <kmezh...@gmail.com>
> To: "Dan Tenenbaum" <dtene...@fredhutch.org>
> Cc: "bioc-devel" <bioc-devel@r-project.org>
> Sent: Tuesday, August 16, 2016 8:33:39 AM
> Subject: Re: [Bioc-devel] commit changes with scenario 1

> Thanks Dr Dan,
> I have multiple files to commit. How can I specify multiple files names?
> 
> git commit -m " resolve prblm" -a "file1.R, file2.R"
> 

You don't need to specify filenames if you use -a. If you do specify filenames 
you should not qute them or put commas in them.

git commit -m 'resolve prblm' file1.R file2.R

Dan



> Thanks
> karim
> 
> 
> On Mon, Aug 8, 2016 at 6:33 PM, Dan Tenenbaum <dtene...@fredhutch.org>
> wrote:
> 
>>
>>
>> - Original Message -
>> > From: "Karim Mezhoud" <kmezh...@gmail.com>
>> > To: "bioc-devel" <bioc-devel@r-project.org>
>> > Sent: Tuesday, August 2, 2016 2:53:53 PM
>> > Subject: [Bioc-devel] commit changes with scenario 1
>>
>> > I am trying to commit some changes to bioCancer
>> > <https://github.com/Bioconductor-mirror/bioCancer>. the issue is no
>> changes
>> > added to commit.
>> >
>> > Please, here is commands. Thanks
>> >
>> >   -  git clone https://github.com/Bioconductor-mirror/bioCancer
>> >   - cd bioCancer/
>> >   - ../update_remotes.sh
>> >
>> >
>> > Already on 'master'
>> > Your branch is up-to-date with 'origin/master'.
>> > Rebuilding
>> > .git/svn/refs/remotes/git-svn/.rev_map.bc3139a8-67e5-0310-
>> 9ffc-ced21a209358
>> > ...
>> > r117706 = 3d3efd35ec0406c4aaa4be764cf4ccb36a77d132
>> > Done rebuilding
>> > .git/svn/refs/remotes/git-svn/.rev_map.bc3139a8-67e5-0310-
>> 9ffc-ced21a209358
>> > Current branch master is up to date.
>> > Commit to git as normal, when you want to push your commits to svn
>> >  1. `git svn rebase` to get the latest SVN changes.
>> >  2. `git svn dcommit --add-author-from` to commit your changes to SVN.
>> >
>> >
>> >
>> >   - Change manually  vignette.Rmd file
>> >   - git commit -m "just vignette"
>>
>> In your git commit command you are not specifying a file to commit.
>> You should either add the -a flag to commit all changed files (which have
>> already been added) or specify the file(s) you want to commit on the
>> command line.
>>
>> Dan
>>
>>
>>
>>
>> >
>> > On branch master
>> > Your branch is up-to-date with 'origin/master'.
>> > Changes not staged for commit:
>> >modified:   vignettes/bioCancer.Rmd
>> >
>> > no changes added to commit
>> >
>> >   - git svn rebase
>> >
>> > vignettes/bioCancer.Rmd: needs update
>> > update-index --refresh: command returned error: 1
>> >
>> >
>> >
>> >   - git svn dcommit --add-author-from
>> >
>> > vignettes/bioCancer.Rmd: needs update
>> > update-index --refresh: command returned error: 1
>> >
>> >   [[alternative HTML version deleted]]
>> >
>> > ___
>> > Bioc-devel@r-project.org mailing list
>> > https://stat.ethz.ch/mailman/listinfo/bioc-devel

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Re: [Bioc-devel] commit changes with scenario 1

2016-08-16 Thread Karim Mezhoud 
Thanks Dr Dan,
I have multiple files to commit. How can I specify multiple files names?

git commit -m " resolve prblm" -a "file1.R, file2.R"

Thanks
karim


On Mon, Aug 8, 2016 at 6:33 PM, Dan Tenenbaum <dtene...@fredhutch.org>
wrote:

>
>
> - Original Message -
> > From: "Karim Mezhoud" <kmezh...@gmail.com>
> > To: "bioc-devel" <bioc-devel@r-project.org>
> > Sent: Tuesday, August 2, 2016 2:53:53 PM
> > Subject: [Bioc-devel] commit changes with scenario 1
>
> > I am trying to commit some changes to bioCancer
> > <https://github.com/Bioconductor-mirror/bioCancer>. the issue is no
> changes
> > added to commit.
> >
> > Please, here is commands. Thanks
> >
> >   -  git clone https://github.com/Bioconductor-mirror/bioCancer
> >   - cd bioCancer/
> >   - ../update_remotes.sh
> >
> >
> > Already on 'master'
> > Your branch is up-to-date with 'origin/master'.
> > Rebuilding
> > .git/svn/refs/remotes/git-svn/.rev_map.bc3139a8-67e5-0310-
> 9ffc-ced21a209358
> > ...
> > r117706 = 3d3efd35ec0406c4aaa4be764cf4ccb36a77d132
> > Done rebuilding
> > .git/svn/refs/remotes/git-svn/.rev_map.bc3139a8-67e5-0310-
> 9ffc-ced21a209358
> > Current branch master is up to date.
> > Commit to git as normal, when you want to push your commits to svn
> >  1. `git svn rebase` to get the latest SVN changes.
> >  2. `git svn dcommit --add-author-from` to commit your changes to SVN.
> >
> >
> >
> >   - Change manually  vignette.Rmd file
> >   - git commit -m "just vignette"
>
> In your git commit command you are not specifying a file to commit.
> You should either add the -a flag to commit all changed files (which have
> already been added) or specify the file(s) you want to commit on the
> command line.
>
> Dan
>
>
>
>
> >
> > On branch master
> > Your branch is up-to-date with 'origin/master'.
> > Changes not staged for commit:
> >modified:   vignettes/bioCancer.Rmd
> >
> > no changes added to commit
> >
> >   - git svn rebase
> >
> > vignettes/bioCancer.Rmd: needs update
> > update-index --refresh: command returned error: 1
> >
> >
> >
> >   - git svn dcommit --add-author-from
> >
> > vignettes/bioCancer.Rmd: needs update
> > update-index --refresh: command returned error: 1
> >
> >   [[alternative HTML version deleted]]
> >
> > ___
> > Bioc-devel@r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
>

[[alternative HTML version deleted]]

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Re: [Bioc-devel] commit changes with scenario 1

2016-08-08 Thread Dan Tenenbaum 


- Original Message -
> From: "Karim Mezhoud" <kmezh...@gmail.com>
> To: "bioc-devel" <bioc-devel@r-project.org>
> Sent: Tuesday, August 2, 2016 2:53:53 PM
> Subject: [Bioc-devel] commit changes with scenario 1

> I am trying to commit some changes to bioCancer
> <https://github.com/Bioconductor-mirror/bioCancer>. the issue is no changes
> added to commit.
> 
> Please, here is commands. Thanks
> 
>   -  git clone https://github.com/Bioconductor-mirror/bioCancer
>   - cd bioCancer/
>   - ../update_remotes.sh
> 
> 
> Already on 'master'
> Your branch is up-to-date with 'origin/master'.
> Rebuilding
> .git/svn/refs/remotes/git-svn/.rev_map.bc3139a8-67e5-0310-9ffc-ced21a209358
> ...
> r117706 = 3d3efd35ec0406c4aaa4be764cf4ccb36a77d132
> Done rebuilding
> .git/svn/refs/remotes/git-svn/.rev_map.bc3139a8-67e5-0310-9ffc-ced21a209358
> Current branch master is up to date.
> Commit to git as normal, when you want to push your commits to svn
>  1. `git svn rebase` to get the latest SVN changes.
>  2. `git svn dcommit --add-author-from` to commit your changes to SVN.
> 
> 
> 
>   - Change manually  vignette.Rmd file
>   - git commit -m "just vignette"

In your git commit command you are not specifying a file to commit. 
You should either add the -a flag to commit all changed files (which have 
already been added) or specify the file(s) you want to commit on the command 
line.

Dan




> 
> On branch master
> Your branch is up-to-date with 'origin/master'.
> Changes not staged for commit:
>modified:   vignettes/bioCancer.Rmd
> 
> no changes added to commit
> 
>   - git svn rebase
> 
> vignettes/bioCancer.Rmd: needs update
> update-index --refresh: command returned error: 1
> 
> 
> 
>   - git svn dcommit --add-author-from
> 
> vignettes/bioCancer.Rmd: needs update
> update-index --refresh: command returned error: 1
> 
>   [[alternative HTML version deleted]]
> 
> ___
> Bioc-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

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[Bioc-devel] commit changes with scenario 1

2016-08-02 Thread Karim Mezhoud 
I am trying to commit some changes to bioCancer
. the issue is no changes
added to commit.

Please, here is commands. Thanks

   -  git clone https://github.com/Bioconductor-mirror/bioCancer
   - cd bioCancer/
   - ../update_remotes.sh


Already on 'master'
Your branch is up-to-date with 'origin/master'.
Rebuilding
.git/svn/refs/remotes/git-svn/.rev_map.bc3139a8-67e5-0310-9ffc-ced21a209358
...
r117706 = 3d3efd35ec0406c4aaa4be764cf4ccb36a77d132
Done rebuilding
.git/svn/refs/remotes/git-svn/.rev_map.bc3139a8-67e5-0310-9ffc-ced21a209358
Current branch master is up to date.
Commit to git as normal, when you want to push your commits to svn
  1. `git svn rebase` to get the latest SVN changes.
  2. `git svn dcommit --add-author-from` to commit your changes to SVN.



   - Change manually  vignette.Rmd file
   - git commit -m "just vignette"



On branch master
Your branch is up-to-date with 'origin/master'.
Changes not staged for commit:
modified:   vignettes/bioCancer.Rmd

no changes added to commit

   - git svn rebase

vignettes/bioCancer.Rmd: needs update
update-index --refresh: command returned error: 1



   - git svn dcommit --add-author-from

vignettes/bioCancer.Rmd: needs update
update-index --refresh: command returned error: 1

[[alternative HTML version deleted]]

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