Re: [Bioc-devel] package citation and version is not updated

2016-02-15 Thread Dan Tenenbaum
OK, I looked into this a bit. The citation is there now and I will continue to 
look into this.
Dan


- Original Message -
> From: "Michael Love" <michaelisaiahl...@gmail.com>
> To: "Dan Tenenbaum" <dtene...@fredhutch.org>
> Cc: "bioc-devel" <bioc-devel@r-project.org>
> Sent: Monday, February 15, 2016 7:36:14 AM
> Subject: Re: [Bioc-devel] package citation and version is not updated

> hi Dan,
> 
> I'm having the same issue with tximport:
> 
> http://bioconductor.org/packages/devel/bioc/html/tximport.html
> 
> The CITATION file has been in there since the package was added to devel
> last week
> 
> https://github.com/Bioconductor-mirror/tximport/blob/master/inst/CITATION
> 
> citation("tximport") works
> 
> thanks,
> Mike
> 
> On Fri, Jan 29, 2016 at 5:56 PM, Dan Tenenbaum <dtene...@fredhutch.org>
> wrote:
> 
>> This is fixed now. Thanks for the report.
>> Dan
>>
>>
>> - Original Message -
>> > From: "Ludwig Geistlinger" <ludwig.geistlin...@bio.ifi.lmu.de>
>> > To: "bioc-devel" <bioc-devel@r-project.org>
>> > Sent: Friday, January 29, 2016 2:06:37 AM
>> > Subject: [Bioc-devel] package citation and version is not updated
>>
>> > Dear Dan,
>> >
>> > For some reason the citation on my package's landing page
>> >
>> > http://bioconductor.org/packages/EnrichmentBrowser.html
>> >
>> > is not displayed in agreement with my inst/CITATION file.
>> >
>> > Furthermore, the version number is also not up to date here, although
>> > displayed correctly at the bottom of the page (--> Package Archives).
>> >
>> > How to resolve this?
>> >
>> > Thx,
>> > Ludwig
>> >
>> > --
>> > Dipl.-Bioinf. Ludwig Geistlinger
>> >
>> > Lehr- und Forschungseinheit für Bioinformatik
>> > Institut für Informatik
>> > Ludwig-Maximilians-Universität München
>> > Amalienstrasse 17, 2. Stock, Büro A201
>> > 80333 München
>> >
>> > Tel.: 089-2180-4067
>> > eMail: ludwig.geistlin...@bio.ifi.lmu.de
>> >
>> > ___
>> > Bioc-devel@r-project.org mailing list
>> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>
>> ___
>> Bioc-devel@r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel

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Re: [Bioc-devel] package citation and version is not updated

2016-02-15 Thread Michael Love
hi Dan,

I'm having the same issue with tximport:

http://bioconductor.org/packages/devel/bioc/html/tximport.html

The CITATION file has been in there since the package was added to devel
last week

https://github.com/Bioconductor-mirror/tximport/blob/master/inst/CITATION

citation("tximport") works

thanks,
Mike

On Fri, Jan 29, 2016 at 5:56 PM, Dan Tenenbaum <dtene...@fredhutch.org>
wrote:

> This is fixed now. Thanks for the report.
> Dan
>
>
> - Original Message -
> > From: "Ludwig Geistlinger" <ludwig.geistlin...@bio.ifi.lmu.de>
> > To: "bioc-devel" <bioc-devel@r-project.org>
> > Sent: Friday, January 29, 2016 2:06:37 AM
> > Subject: [Bioc-devel] package citation and version is not updated
>
> > Dear Dan,
> >
> > For some reason the citation on my package's landing page
> >
> > http://bioconductor.org/packages/EnrichmentBrowser.html
> >
> > is not displayed in agreement with my inst/CITATION file.
> >
> > Furthermore, the version number is also not up to date here, although
> > displayed correctly at the bottom of the page (--> Package Archives).
> >
> > How to resolve this?
> >
> > Thx,
> > Ludwig
> >
> > --
> > Dipl.-Bioinf. Ludwig Geistlinger
> >
> > Lehr- und Forschungseinheit für Bioinformatik
> > Institut für Informatik
> > Ludwig-Maximilians-Universität München
> > Amalienstrasse 17, 2. Stock, Büro A201
> > 80333 München
> >
> > Tel.: 089-2180-4067
> > eMail: ludwig.geistlin...@bio.ifi.lmu.de
> >
> > ___
> > Bioc-devel@r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
> ___
> Bioc-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>

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[Bioc-devel] package citation and version is not updated

2016-01-29 Thread Ludwig Geistlinger
Dear Dan,

For some reason the citation on my package's landing page

http://bioconductor.org/packages/EnrichmentBrowser.html

is not displayed in agreement with my inst/CITATION file.

Furthermore, the version number is also not up to date here, although
displayed correctly at the bottom of the page (--> Package Archives).

How to resolve this?

Thx,
Ludwig

-- 
Dipl.-Bioinf. Ludwig Geistlinger

Lehr- und Forschungseinheit für Bioinformatik
Institut für Informatik
Ludwig-Maximilians-Universität München
Amalienstrasse 17, 2. Stock, Büro A201
80333 München

Tel.: 089-2180-4067
eMail: ludwig.geistlin...@bio.ifi.lmu.de

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Re: [Bioc-devel] package citation and version is not updated

2016-01-29 Thread Dan Tenenbaum
I will look into this, thanks for the report.
Dan


- Original Message -
> From: "Ludwig Geistlinger" <ludwig.geistlin...@bio.ifi.lmu.de>
> To: "bioc-devel" <bioc-devel@r-project.org>
> Sent: Friday, January 29, 2016 2:06:37 AM
> Subject: [Bioc-devel] package citation and version is not updated

> Dear Dan,
> 
> For some reason the citation on my package's landing page
> 
> http://bioconductor.org/packages/EnrichmentBrowser.html
> 
> is not displayed in agreement with my inst/CITATION file.
> 
> Furthermore, the version number is also not up to date here, although
> displayed correctly at the bottom of the page (--> Package Archives).
> 
> How to resolve this?
> 
> Thx,
> Ludwig
> 
> --
> Dipl.-Bioinf. Ludwig Geistlinger
> 
> Lehr- und Forschungseinheit für Bioinformatik
> Institut für Informatik
> Ludwig-Maximilians-Universität München
> Amalienstrasse 17, 2. Stock, Büro A201
> 80333 München
> 
> Tel.: 089-2180-4067
> eMail: ludwig.geistlin...@bio.ifi.lmu.de
> 
> ___
> Bioc-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

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Re: [Bioc-devel] package citation and version is not updated

2016-01-29 Thread Dan Tenenbaum
This is fixed now. Thanks for the report.
Dan


- Original Message -
> From: "Ludwig Geistlinger" <ludwig.geistlin...@bio.ifi.lmu.de>
> To: "bioc-devel" <bioc-devel@r-project.org>
> Sent: Friday, January 29, 2016 2:06:37 AM
> Subject: [Bioc-devel] package citation and version is not updated

> Dear Dan,
> 
> For some reason the citation on my package's landing page
> 
> http://bioconductor.org/packages/EnrichmentBrowser.html
> 
> is not displayed in agreement with my inst/CITATION file.
> 
> Furthermore, the version number is also not up to date here, although
> displayed correctly at the bottom of the page (--> Package Archives).
> 
> How to resolve this?
> 
> Thx,
> Ludwig
> 
> --
> Dipl.-Bioinf. Ludwig Geistlinger
> 
> Lehr- und Forschungseinheit für Bioinformatik
> Institut für Informatik
> Ludwig-Maximilians-Universität München
> Amalienstrasse 17, 2. Stock, Büro A201
> 80333 München
> 
> Tel.: 089-2180-4067
> eMail: ludwig.geistlin...@bio.ifi.lmu.de
> 
> ___
> Bioc-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

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