Re: [Bioc-devel] rifiComparative
In RELEASE_3_17 branch your vignette has
devtools::load_all(".")
I don't know why that would be necessary. 1.0.0 in the RELEASE_3_17
branch does not have devtools in Suggests.
On Sun, May 21, 2023 at 3:53 PM Loubna Youssar wrote:
> Hello,
>
> I am the developer and maintainer of rifiComparative package. I was
> notified by an error and I fixed it then pushed three weeks ago.
> To my surprise I did get the same error with the last package version some
> days ago. This would mean the push did not work even I do remember no error
> was displayed. How can I be sure that my updated package with no error was
> successfully pushed? am I supposed to receive a confirmatory email?
>
> Here is the new version:
>
> Package: rifiComparative
> Title: 'rifiComparative' compares the output of rifi from two different
> conditions.
> Version: 1.1.1
>
> The error sent:
>
> Package: rifiComparative
> Version: 1.0.0
> Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check
> --install=check:rifiComparative.install-out.txt
> --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings
> rifiComparative_1.0.0.tar.gz
> StartedAt: 2023-05-20 00:15:11 -0400 (Sat, 20 May 2023)
> EndedAt: 2023-05-20 00:26:00 -0400 (Sat, 20 May 2023)
> EllapsedTime: 649.2 seconds
> RetCode: 1
> Status: ERROR
> CheckDir: rifiComparative.Rcheck
> Warnings: NA
>
> Thanks in advance for your assistance
>
> Loubna
>
> [[alternative HTML version deleted]]
>
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> Bioc-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
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Re: [Bioc-devel] rifiComparative
Hi Loubna, Was the error in release or the devel version? Devel version report: http://bioconductor.org/checkResults/3.18/bioc-LATEST/rifiComparative/ Release version report: http://bioconductor.org/checkResults/release/bioc-LATEST/rifiComparative/ Perhaps, your push was to the devel version and resolved the error there? Additionally, if you check the error, it is regarding package devtools' (un)availability. Please note that using `devtools::load_all()` is not recommended in the vignette. You should instead load your package by using `library()` as anyone else (the end user) would do at their end. Finally, you can always check whether your last commits were successfully picked at two places: the build reports (links above) or also at https://code.bioconductor.org/browse/ Hope this helps. Best wishes, Sarvesh On Sun, 21 May 2023 at 20:53, Loubna Youssar wrote: > Hello, > > I am the developer and maintainer of rifiComparative package. I was > notified by an error and I fixed it then pushed three weeks ago. > To my surprise I did get the same error with the last package version some > days ago. This would mean the push did not work even I do remember no error > was displayed. How can I be sure that my updated package with no error was > successfully pushed? am I supposed to receive a confirmatory email? > > Here is the new version: > > Package: rifiComparative > Title: 'rifiComparative' compares the output of rifi from two different > conditions. > Version: 1.1.1 > > The error sent: > > Package: rifiComparative > Version: 1.0.0 > Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check > --install=check:rifiComparative.install-out.txt > --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings > rifiComparative_1.0.0.tar.gz > StartedAt: 2023-05-20 00:15:11 -0400 (Sat, 20 May 2023) > EndedAt: 2023-05-20 00:26:00 -0400 (Sat, 20 May 2023) > EllapsedTime: 649.2 seconds > RetCode: 1 > Status: ERROR > CheckDir: rifiComparative.Rcheck > Warnings: NA > > Thanks in advance for your assistance > > Loubna > > [[alternative HTML version deleted]] > > ___ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > -- thanks! -Sarvesh Q: Why is this email five sentences or less? A: http://five.sentenc.es [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
[Bioc-devel] rifiComparative
Hello, I am the developer and maintainer of rifiComparative package. I was notified by an error and I fixed it then pushed three weeks ago. To my surprise I did get the same error with the last package version some days ago. This would mean the push did not work even I do remember no error was displayed. How can I be sure that my updated package with no error was successfully pushed? am I supposed to receive a confirmatory email? Here is the new version: Package: rifiComparative Title: 'rifiComparative' compares the output of rifi from two different conditions. Version: 1.1.1 The error sent: Package: rifiComparative Version: 1.0.0 Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD check --install=check:rifiComparative.install-out.txt --library=/home/biocbuild/bbs-3.17-bioc/R/site-library --timings rifiComparative_1.0.0.tar.gz StartedAt: 2023-05-20 00:15:11 -0400 (Sat, 20 May 2023) EndedAt: 2023-05-20 00:26:00 -0400 (Sat, 20 May 2023) EllapsedTime: 649.2 seconds RetCode: 1 Status: ERROR CheckDir: rifiComparative.Rcheck Warnings: NA Thanks in advance for your assistance Loubna [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
