Re: [Bioc-devel] report package issue to Bioconductor

2017-01-06 Thread Obenchain, Valerie
On 01/06/2017 09:53 AM, Obenchain, Valerie wrote:
> Hi,
>
> It looks like CorMut doesn't have a github repo so the best approach is
> to contact the maintainer directly or cc them (zpl...@gmail.com) instead
> of creating your own gist. Maybe you've tried this? Once the transition

I should have been more clear here and said ... "Once the Bioconductor
package repo has been transitioned from svn to git / github ...".
The goal is to have the transition finalized before the spring release.

Valerie
> from svn to git / github is complete you can open issues or submit a
> pull request directly to the package repo.
>
> Valerie
>
> On 01/03/2017 11:39 PM, Yu, Guangchuang wrote:
>> Dear all,
>>
>> Some packages never updated after they publish a paper, and they just
>> ignore bug report.
>>
>> I think we need somewhere, maybe on github, to post code review and
>> Bioconductor core team can take action if maintainer fail to fix issue.
>>
>> Here is a quick look of the CorMut package:
>> https://gist.github.com/GuangchuangYu/91b3396c7e49ab42c565a9cda3c35e18.
>>
>> There should be more issues than I can found with quick look of the source
>> code.
>>
>> Best wishes,
>> Guangchuang
>> ​
>
>
>
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Re: [Bioc-devel] report package issue to Bioconductor

2017-01-06 Thread Obenchain, Valerie
Hi,

It looks like CorMut doesn't have a github repo so the best approach is
to contact the maintainer directly or cc them (zpl...@gmail.com) instead
of creating your own gist. Maybe you've tried this? Once the transition
from svn to git / github is complete you can open issues or submit a
pull request directly to the package repo.

Valerie

On 01/03/2017 11:39 PM, Yu, Guangchuang wrote:
> Dear all,
>
> Some packages never updated after they publish a paper, and they just
> ignore bug report.
>
> I think we need somewhere, maybe on github, to post code review and
> Bioconductor core team can take action if maintainer fail to fix issue.
>
> Here is a quick look of the CorMut package:
> https://gist.github.com/GuangchuangYu/91b3396c7e49ab42c565a9cda3c35e18.
>
> There should be more issues than I can found with quick look of the source
> code.
>
> Best wishes,
> Guangchuang
> ​




This email message may contain legally privileged and/or confidential 
information.  If you are not the intended recipient(s), or the employee or 
agent responsible for the delivery of this message to the intended 
recipient(s), you are hereby notified that any disclosure, copying, 
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this message in error, please notify the sender immediately by e-mail and 
delete this email message from your computer. Thank you.
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