Great - thanks!
On 15/01/2009 14:50, John Harwell j...@brainvis.wustl.edu wrote:
Alex,
To project foci to the PALS atlas, the foci must be linked to studies
with valid stereotaxic spaces. The stereotaxic space determines which
of the surfaces inside of the Caret distribution are used to project
the focus. Studies are edited using the Attributes Menu-Study
Metadata-Edit Studies Dialog. There is some documentation on this
dialog at
http://brainmap.wustl.edu/caret/caret_help/dialogs/study_metadata.html
.
Once studies have been entered, return to the Map Stereotaxic Focus
Dialog and use the edit mode. Pressing the Study Metadata Button
allows one to choose the appropriate study for the focus. After
linking the study to the focus press the Apply button and the focus
should be properly projected.
---
John Harwell
j...@brainvis.wustl.edu
Department of Anatomy and Neurobiology
Washington University School of Medicine
660 S. Euclid Ave Box 8108
Saint Louis, MO 63110
On Jan 14, 2009, at 3:48 PM, Alex Fornito wrote:
Hi,
I entered a few stereotactic foci manually and saved
the .foci, .fociproj,
and .focicolor files.
When I opened Caret up again and re-loaded the spec file, I was
unable to
view the foci on the surface. I can see them in the foci windows of
the
display control, but if I select Layers foci Foci projection to
PALS
atlas, I get a message saying These foci do not have associated
stereotaxic
spaces: ...
I was wondering whether it is possible to visualize the foci again,
without
entering them all again.
Thanks,
Alex
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--
Alex Fornito
CJ Martin Post-Doctoral Fellow
Brain Mapping Unit
Department of Psychiatry
University of Cambridge
Downing Site
Downing St, Cambridge
UK CB2 3EB
Email:af...@cam.ac.uk
Phone:+44 (0) 1223 764670
Fax:+44 (0) 1223 336581
Australian Details:
Melbourne Neuropsychiatry Centre
National Neuroscience Facility
Levels 1 2, Alan Gilbert Building
161 Barry St
Carlton South 3053
Victoria, Australia
Email:forni...@unimelb.edu.au
Phone:+61 3 8344 1861
Fax:+61 3 9348 0469
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