Re: [ccp4bb] Request for assistance with structure solution

2024-04-19 Thread Adewumi Adeyeye
Thank you @Yehudi BLOCH, Kay for the help. 


 

Kind Regards,

Adewumi Adeyeye, (PhD Candidate)Department of Biochemistry, Genetics, and 
Microbiology
Structural Biology Group,
Room 3-7, Agricultural Sciences Building,
University of Pretoria
c/o University & Lynnwood Roads
Hatfield
Pretoria
0083

Cell: +27638643131
South Africa

 

On Wednesday, April 17, 2024 at 10:48:04 AM GMT+1, Kay Diederichs 
 wrote:  
 
 good detective work indeed!
Kay

On Tue, 16 Apr 2024 14:40:15 +0100, Yehudi BLOCH  
wrote:

>Dear Adewumi
>
>I'm afraid the 85% complete dataset is a contaminant as well.
>PDB 2r6s and related entries for E.coli Gab protein have near identical unit 
>cell parameters. The autoprocessed (?) .mtz file you attached also solves with 
>this E.coli protein.
>I suppose that if you rerun XDS with the given unit cell parameters things 
>should process.
>
>Best
>Yehudi
>
>
>
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[ccp4bb] CCP4I TERMINATION STATUS 0 "child process exited abnormally"

2020-07-22 Thread Adewumi Adeyeye
Dear all,
I need assistance with solving my protein structure.
I have attempted (using remote access)  to integrate my diffraction images (.h5 
format) using xia2 but I keep getting the following error message:

The program run with command: xia2 /dls/i04/data/2020/  
has failed with error message
child process exited abnormally


#CCP4I TERMINATION STATUS 0 "child process exited abnormally"

I will appreciate suggestions on how to overcome this. 

Thanks.

Adewumi Adeyeye, (PhD Candidate)
Department of Biochemistry, Genetics, and Microbiology
Structural Biology Group,
Room 3-7, Agricultural Sciences Building,
University of Pretoria
c/o University & Lynnwood Roads
Hatfield
Pretoria
0083

Cell: +27630996979
South Africa



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Re: [ccp4bb] Free Springer e-books

2020-04-24 Thread Adewumi Adeyeye
Thank you.


 

Kind Regards,

Adewumi Adeyeye, (PhD Candidate)Department of Biochemistry, Genetics, and 
Microbiology
Structural Biology Group,
Room 3-7, Agricultural Sciences Building,
University of Pretoria
c/o University & Lynnwood Roads
Hatfield
Pretoria
0083

Cell: +27630996979
South Africa

 

On Friday, April 24, 2020, 6:11:56 PM GMT+2, John R Helliwell 
 wrote:  
 
 This message is eligible for Automatic Cleanup! (jrhelliw...@gmail.com) Add 
cleanup rule | More info
 Dear Colleagues,Thankyou Eugene.Just to mention that I reviewed the fourth 
edition of the book by Ladd and 
Palmer:-http://journals.iucr.org/d/issues/2006/03/00/pf0023/index.html(IUCr 
Journals’ book reviews are free to access.)Best wishes,John 
Emeritus Professor John R Helliwell DSc




On 24 Apr 2020, at 16:26, Eugene Osipov  wrote:



Dear CCP4 community,In case if someone missed - Springer e-books are available 
for free [Limited 
time]:https://www.thebiomics.com/notes/springer-free-e-books-list.htmlFor 
example, do not miss the opportunity to grab "Structure Determination by X-ray 
Crystallography":https://link.springer.com/book/10.1007%2F978-1-4614-3954-7

Kind regards,-- 
Evgenii OsipovLaboratory for Biocrystallography, Department of Pharmaceutical 
Sciences, KU Leuven O

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